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Advances in spiral fMRI: A high-resolution dataset
We present data collected for the research article “Advances in Spiral fMRI: A High-resolution Study with Single-shot Acquisition” (Kasper et al. 2022). All data was acquired on a 7T ultra-high field MR system (Philips Achieva), equipped with a concurrent magnetic field monitoring setup based on 16...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8968017/ https://www.ncbi.nlm.nih.gov/pubmed/35372651 http://dx.doi.org/10.1016/j.dib.2022.108050 |
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author | Kasper, Lars Engel, Maria Heinzle, Jakob Mueller-Schrader, Matthias Graedel, Nadine N. Reber, Jonas Schmid, Thomas Barmet, Christoph Wilm, Bertram J. Stephan, Klaas Enno Pruessmann, Klaas P. |
author_facet | Kasper, Lars Engel, Maria Heinzle, Jakob Mueller-Schrader, Matthias Graedel, Nadine N. Reber, Jonas Schmid, Thomas Barmet, Christoph Wilm, Bertram J. Stephan, Klaas Enno Pruessmann, Klaas P. |
author_sort | Kasper, Lars |
collection | PubMed |
description | We present data collected for the research article “Advances in Spiral fMRI: A High-resolution Study with Single-shot Acquisition” (Kasper et al. 2022). All data was acquired on a 7T ultra-high field MR system (Philips Achieva), equipped with a concurrent magnetic field monitoring setup based on 16 NMR probes. For task-based fMRI, a visual quarterfield stimulation paradigm was employed, alongside physiological monitoring via peripheral recordings. This data collection contains different datasets pertaining to different purposes: (1) Measured magnetic field dynamics (k(0), spiral k-space trajectories, 2nd order spherical harmonics, concomitant fields) during ultra-high field fMRI sessions from six subjects, as well as concurrent temperature curves of the gradient coil, to explore MR system and subject-induced variability of field fluctuations and assess the impact of potential correction methods. (2) MR Raw Data, i.e., coil and concurrent encoding magnetic field (trajectory) data, of a single subject, as well as nominal spiral gradient waveforms, precomputed B(0) and coil sensitivity maps, to enable testing of alternative image reconstruction approaches for spiral fMRI data. (3) Reconstructed image time series of the same subject alongside behavioral and physiological logfiles, to reproduce the fMRI preprocessing and analysis, as well as figures presented in the research article related to this article, using the published analysis code repository. All data is provided in standardized formats for the respective research area. In particular, ISMRMRD (HDF5) is used to store raw coil data and spiral trajectories, as well as measured field dynamics. Likewise, the NIfTI format is used for all imaging data (anatomical MRI and spiral fMRI, B(0) and coil sensitivity maps). |
format | Online Article Text |
id | pubmed-8968017 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-89680172022-04-01 Advances in spiral fMRI: A high-resolution dataset Kasper, Lars Engel, Maria Heinzle, Jakob Mueller-Schrader, Matthias Graedel, Nadine N. Reber, Jonas Schmid, Thomas Barmet, Christoph Wilm, Bertram J. Stephan, Klaas Enno Pruessmann, Klaas P. Data Brief Data Article We present data collected for the research article “Advances in Spiral fMRI: A High-resolution Study with Single-shot Acquisition” (Kasper et al. 2022). All data was acquired on a 7T ultra-high field MR system (Philips Achieva), equipped with a concurrent magnetic field monitoring setup based on 16 NMR probes. For task-based fMRI, a visual quarterfield stimulation paradigm was employed, alongside physiological monitoring via peripheral recordings. This data collection contains different datasets pertaining to different purposes: (1) Measured magnetic field dynamics (k(0), spiral k-space trajectories, 2nd order spherical harmonics, concomitant fields) during ultra-high field fMRI sessions from six subjects, as well as concurrent temperature curves of the gradient coil, to explore MR system and subject-induced variability of field fluctuations and assess the impact of potential correction methods. (2) MR Raw Data, i.e., coil and concurrent encoding magnetic field (trajectory) data, of a single subject, as well as nominal spiral gradient waveforms, precomputed B(0) and coil sensitivity maps, to enable testing of alternative image reconstruction approaches for spiral fMRI data. (3) Reconstructed image time series of the same subject alongside behavioral and physiological logfiles, to reproduce the fMRI preprocessing and analysis, as well as figures presented in the research article related to this article, using the published analysis code repository. All data is provided in standardized formats for the respective research area. In particular, ISMRMRD (HDF5) is used to store raw coil data and spiral trajectories, as well as measured field dynamics. Likewise, the NIfTI format is used for all imaging data (anatomical MRI and spiral fMRI, B(0) and coil sensitivity maps). Elsevier 2022-03-12 /pmc/articles/PMC8968017/ /pubmed/35372651 http://dx.doi.org/10.1016/j.dib.2022.108050 Text en © 2022 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Kasper, Lars Engel, Maria Heinzle, Jakob Mueller-Schrader, Matthias Graedel, Nadine N. Reber, Jonas Schmid, Thomas Barmet, Christoph Wilm, Bertram J. Stephan, Klaas Enno Pruessmann, Klaas P. Advances in spiral fMRI: A high-resolution dataset |
title | Advances in spiral fMRI: A high-resolution dataset |
title_full | Advances in spiral fMRI: A high-resolution dataset |
title_fullStr | Advances in spiral fMRI: A high-resolution dataset |
title_full_unstemmed | Advances in spiral fMRI: A high-resolution dataset |
title_short | Advances in spiral fMRI: A high-resolution dataset |
title_sort | advances in spiral fmri: a high-resolution dataset |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8968017/ https://www.ncbi.nlm.nih.gov/pubmed/35372651 http://dx.doi.org/10.1016/j.dib.2022.108050 |
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