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Deep Learning in Plant Phenological Research: A Systematic Literature Review

Climate change represents one of the most critical threats to biodiversity with far-reaching consequences for species interactions, the functioning of ecosystems, or the assembly of biotic communities. Plant phenology research has gained increasing attention as the timing of periodic events in plant...

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Autores principales: Katal, Negin, Rzanny, Michael, Mäder, Patrick, Wäldchen, Jana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8969581/
https://www.ncbi.nlm.nih.gov/pubmed/35371160
http://dx.doi.org/10.3389/fpls.2022.805738
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author Katal, Negin
Rzanny, Michael
Mäder, Patrick
Wäldchen, Jana
author_facet Katal, Negin
Rzanny, Michael
Mäder, Patrick
Wäldchen, Jana
author_sort Katal, Negin
collection PubMed
description Climate change represents one of the most critical threats to biodiversity with far-reaching consequences for species interactions, the functioning of ecosystems, or the assembly of biotic communities. Plant phenology research has gained increasing attention as the timing of periodic events in plants is strongly affected by seasonal and interannual climate variation. Recent technological development allowed us to gather invaluable data at a variety of spatial and ecological scales. The feasibility of phenological monitoring today and in the future depends heavily on developing tools capable of efficiently analyzing these enormous amounts of data. Deep Neural Networks learn representations from data with impressive accuracy and lead to significant breakthroughs in, e.g., image processing. This article is the first systematic literature review aiming to thoroughly analyze all primary studies on deep learning approaches in plant phenology research. In a multi-stage process, we selected 24 peer-reviewed studies published in the last five years (2016–2021). After carefully analyzing these studies, we describe the applied methods categorized according to the studied phenological stages, vegetation type, spatial scale, data acquisition- and deep learning methods. Furthermore, we identify and discuss research trends and highlight promising future directions. We present a systematic overview of previously applied methods on different tasks that can guide this emerging complex research field.
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spelling pubmed-89695812022-04-01 Deep Learning in Plant Phenological Research: A Systematic Literature Review Katal, Negin Rzanny, Michael Mäder, Patrick Wäldchen, Jana Front Plant Sci Plant Science Climate change represents one of the most critical threats to biodiversity with far-reaching consequences for species interactions, the functioning of ecosystems, or the assembly of biotic communities. Plant phenology research has gained increasing attention as the timing of periodic events in plants is strongly affected by seasonal and interannual climate variation. Recent technological development allowed us to gather invaluable data at a variety of spatial and ecological scales. The feasibility of phenological monitoring today and in the future depends heavily on developing tools capable of efficiently analyzing these enormous amounts of data. Deep Neural Networks learn representations from data with impressive accuracy and lead to significant breakthroughs in, e.g., image processing. This article is the first systematic literature review aiming to thoroughly analyze all primary studies on deep learning approaches in plant phenology research. In a multi-stage process, we selected 24 peer-reviewed studies published in the last five years (2016–2021). After carefully analyzing these studies, we describe the applied methods categorized according to the studied phenological stages, vegetation type, spatial scale, data acquisition- and deep learning methods. Furthermore, we identify and discuss research trends and highlight promising future directions. We present a systematic overview of previously applied methods on different tasks that can guide this emerging complex research field. Frontiers Media S.A. 2022-03-17 /pmc/articles/PMC8969581/ /pubmed/35371160 http://dx.doi.org/10.3389/fpls.2022.805738 Text en Copyright © 2022 Katal, Rzanny, Mäder and Wäldchen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Katal, Negin
Rzanny, Michael
Mäder, Patrick
Wäldchen, Jana
Deep Learning in Plant Phenological Research: A Systematic Literature Review
title Deep Learning in Plant Phenological Research: A Systematic Literature Review
title_full Deep Learning in Plant Phenological Research: A Systematic Literature Review
title_fullStr Deep Learning in Plant Phenological Research: A Systematic Literature Review
title_full_unstemmed Deep Learning in Plant Phenological Research: A Systematic Literature Review
title_short Deep Learning in Plant Phenological Research: A Systematic Literature Review
title_sort deep learning in plant phenological research: a systematic literature review
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8969581/
https://www.ncbi.nlm.nih.gov/pubmed/35371160
http://dx.doi.org/10.3389/fpls.2022.805738
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