Cargando…
Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India
INTRODUCTION: The study aimed to develop a reproducible, open-source, and scalable framework for extracting climate data from satellite imagery, understanding dengue's decadal trend in India, and estimating the relationship between dengue occurrence and climatic factors. MATERIALS AND METHODS:...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer - Medknow
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8971875/ https://www.ncbi.nlm.nih.gov/pubmed/35368491 http://dx.doi.org/10.4103/ijcm.ijcm_862_21 |
_version_ | 1784679730321031168 |
---|---|
author | Singh, Gurpreet Mitra, Arun Soman, Biju |
author_facet | Singh, Gurpreet Mitra, Arun Soman, Biju |
author_sort | Singh, Gurpreet |
collection | PubMed |
description | INTRODUCTION: The study aimed to develop a reproducible, open-source, and scalable framework for extracting climate data from satellite imagery, understanding dengue's decadal trend in India, and estimating the relationship between dengue occurrence and climatic factors. MATERIALS AND METHODS: A framework was developed in the Open Source Software, and it was empirically tested using reported annual dengue occurrence data in India during 2010–2019. Census 2011 and population projections were used to calculate incidence rates. Zonal statistics were performed to extract climate parameters. Correlation coefficients were calculated to estimate the relationship of dengue with the annual average of daily mean and minimum temperature and rainy days. RESULTS: Total 818,973 dengue cases were reported from India, with median annual incidence of 6.57 per lakh population; it was high in 2019 and 2017 (11.80 and 11.55 per lakh) and the Southern region (8.18 per lakh). The highest median annual dengue incidence was observed in Punjab (24.49 per lakh). Daily climatic data were extracted from 1164 coordinate locations across the country for the decadal period (4,249,734 observations). The annual average of daily temperature and rainy days positively correlated with dengue in India (r = 0.31 and 0.06, at P < 0.01 and 0.30, respectively). CONCLUSION: The study provides a reproducible algorithm for bulk climatic data extraction from research-level satellite imagery. Infectious disease models can be used to understand disease epidemiology and strengthen disease surveillance in the country. |
format | Online Article Text |
id | pubmed-8971875 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Wolters Kluwer - Medknow |
record_format | MEDLINE/PubMed |
spelling | pubmed-89718752022-04-02 Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India Singh, Gurpreet Mitra, Arun Soman, Biju Indian J Community Med Original Article INTRODUCTION: The study aimed to develop a reproducible, open-source, and scalable framework for extracting climate data from satellite imagery, understanding dengue's decadal trend in India, and estimating the relationship between dengue occurrence and climatic factors. MATERIALS AND METHODS: A framework was developed in the Open Source Software, and it was empirically tested using reported annual dengue occurrence data in India during 2010–2019. Census 2011 and population projections were used to calculate incidence rates. Zonal statistics were performed to extract climate parameters. Correlation coefficients were calculated to estimate the relationship of dengue with the annual average of daily mean and minimum temperature and rainy days. RESULTS: Total 818,973 dengue cases were reported from India, with median annual incidence of 6.57 per lakh population; it was high in 2019 and 2017 (11.80 and 11.55 per lakh) and the Southern region (8.18 per lakh). The highest median annual dengue incidence was observed in Punjab (24.49 per lakh). Daily climatic data were extracted from 1164 coordinate locations across the country for the decadal period (4,249,734 observations). The annual average of daily temperature and rainy days positively correlated with dengue in India (r = 0.31 and 0.06, at P < 0.01 and 0.30, respectively). CONCLUSION: The study provides a reproducible algorithm for bulk climatic data extraction from research-level satellite imagery. Infectious disease models can be used to understand disease epidemiology and strengthen disease surveillance in the country. Wolters Kluwer - Medknow 2022 2022-03-16 /pmc/articles/PMC8971875/ /pubmed/35368491 http://dx.doi.org/10.4103/ijcm.ijcm_862_21 Text en Copyright: © 2022 Indian Journal of Community Medicine https://creativecommons.org/licenses/by-nc-sa/4.0/This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms. |
spellingShingle | Original Article Singh, Gurpreet Mitra, Arun Soman, Biju Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India |
title | Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India |
title_full | Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India |
title_fullStr | Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India |
title_full_unstemmed | Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India |
title_short | Development and Use of a Reproducible Framework for Spatiotemporal Climatic Risk Assessment and its Association with Decadal Trend of Dengue in India |
title_sort | development and use of a reproducible framework for spatiotemporal climatic risk assessment and its association with decadal trend of dengue in india |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8971875/ https://www.ncbi.nlm.nih.gov/pubmed/35368491 http://dx.doi.org/10.4103/ijcm.ijcm_862_21 |
work_keys_str_mv | AT singhgurpreet developmentanduseofareproducibleframeworkforspatiotemporalclimaticriskassessmentanditsassociationwithdecadaltrendofdengueinindia AT mitraarun developmentanduseofareproducibleframeworkforspatiotemporalclimaticriskassessmentanditsassociationwithdecadaltrendofdengueinindia AT somanbiju developmentanduseofareproducibleframeworkforspatiotemporalclimaticriskassessmentanditsassociationwithdecadaltrendofdengueinindia |