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Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI
Rapid development in Magnetic Resonance Imaging (MRI) has played a key role in prenatal diagnosis over the last few years. Deep learning (DL) architectures can facilitate the process of anomaly detection and affected-organ classification, making diagnosis more accurate and observer-independent. We p...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8972161/ https://www.ncbi.nlm.nih.gov/pubmed/35372832 http://dx.doi.org/10.3389/frai.2022.832485 |
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author | Lo, Justin Lim, Adam Wagner, Matthias W. Ertl-Wagner, Birgit Sussman, Dafna |
author_facet | Lo, Justin Lim, Adam Wagner, Matthias W. Ertl-Wagner, Birgit Sussman, Dafna |
author_sort | Lo, Justin |
collection | PubMed |
description | Rapid development in Magnetic Resonance Imaging (MRI) has played a key role in prenatal diagnosis over the last few years. Deep learning (DL) architectures can facilitate the process of anomaly detection and affected-organ classification, making diagnosis more accurate and observer-independent. We propose a novel DL image classification architecture, Fetal Organ Anomaly Classification Network (FOAC-Net), which uses squeeze-and-excitation (SE) and naïve inception (NI) modules to automatically identify anomalies in fetal organs. This architecture can identify normal fetal anatomy, as well as detect anomalies present in the (1) brain, (2) spinal cord, and (3) heart. In this retrospective study, we included fetal 3-dimensional (3D) SSFP sequences of 36 participants. We classified the images on a slice-by-slice basis. FOAC-Net achieved a classification accuracy of 85.06, 85.27, 89.29, and 82.20% when predicting brain anomalies, no anomalies (normal), spinal cord anomalies, and heart anomalies, respectively. In a comparison study, FOAC-Net outperformed other state-of-the-art classification architectures in terms of class-average F1 and accuracy. This work aims to develop a novel classification architecture identifying the affected organs in fetal MRI. |
format | Online Article Text |
id | pubmed-8972161 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89721612022-04-02 Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI Lo, Justin Lim, Adam Wagner, Matthias W. Ertl-Wagner, Birgit Sussman, Dafna Front Artif Intell Artificial Intelligence Rapid development in Magnetic Resonance Imaging (MRI) has played a key role in prenatal diagnosis over the last few years. Deep learning (DL) architectures can facilitate the process of anomaly detection and affected-organ classification, making diagnosis more accurate and observer-independent. We propose a novel DL image classification architecture, Fetal Organ Anomaly Classification Network (FOAC-Net), which uses squeeze-and-excitation (SE) and naïve inception (NI) modules to automatically identify anomalies in fetal organs. This architecture can identify normal fetal anatomy, as well as detect anomalies present in the (1) brain, (2) spinal cord, and (3) heart. In this retrospective study, we included fetal 3-dimensional (3D) SSFP sequences of 36 participants. We classified the images on a slice-by-slice basis. FOAC-Net achieved a classification accuracy of 85.06, 85.27, 89.29, and 82.20% when predicting brain anomalies, no anomalies (normal), spinal cord anomalies, and heart anomalies, respectively. In a comparison study, FOAC-Net outperformed other state-of-the-art classification architectures in terms of class-average F1 and accuracy. This work aims to develop a novel classification architecture identifying the affected organs in fetal MRI. Frontiers Media S.A. 2022-03-18 /pmc/articles/PMC8972161/ /pubmed/35372832 http://dx.doi.org/10.3389/frai.2022.832485 Text en Copyright © 2022 Lo, Lim, Wagner, Ertl-Wagner and Sussman. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Artificial Intelligence Lo, Justin Lim, Adam Wagner, Matthias W. Ertl-Wagner, Birgit Sussman, Dafna Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI |
title | Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI |
title_full | Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI |
title_fullStr | Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI |
title_full_unstemmed | Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI |
title_short | Fetal Organ Anomaly Classification Network for Identifying Organ Anomalies in Fetal MRI |
title_sort | fetal organ anomaly classification network for identifying organ anomalies in fetal mri |
topic | Artificial Intelligence |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8972161/ https://www.ncbi.nlm.nih.gov/pubmed/35372832 http://dx.doi.org/10.3389/frai.2022.832485 |
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