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Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir
We present a simulation scheme for path integral simulation of molecular liquids where a small open region is embedded in a large reservoir of non interacting point‐particles. The scheme is based on the latest development of the adaptive resolution technique AdResS and allows for the space‐dependent...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8973269/ https://www.ncbi.nlm.nih.gov/pubmed/35218165 http://dx.doi.org/10.1002/open.202100286 |
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author | Evangelakis, Antonios Panahian Jand, Sara Delle Site, Luigi |
author_facet | Evangelakis, Antonios Panahian Jand, Sara Delle Site, Luigi |
author_sort | Evangelakis, Antonios |
collection | PubMed |
description | We present a simulation scheme for path integral simulation of molecular liquids where a small open region is embedded in a large reservoir of non interacting point‐particles. The scheme is based on the latest development of the adaptive resolution technique AdResS and allows for the space‐dependent change of molecular resolution from a path integral representation with 120 degrees of freedom to a point particle that does not interact with other molecules and vice versa. The method is applied to liquid water and implies a sizable gain regarding the request of computational resources compared to full path integral simulations. Given the role of water as universal solvent with a specific hydrogen bonding network, the path integral treatment of water molecules is important to describe the quantum effects of hydrogen atoms’ delocalization in space on the hydrogen bonding network. The method presented here implies feasible computational efforts compared to full path integral simulations of liquid water which, on large scales, are often prohibitive. |
format | Online Article Text |
id | pubmed-8973269 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89732692022-04-05 Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir Evangelakis, Antonios Panahian Jand, Sara Delle Site, Luigi ChemistryOpen Research Articles We present a simulation scheme for path integral simulation of molecular liquids where a small open region is embedded in a large reservoir of non interacting point‐particles. The scheme is based on the latest development of the adaptive resolution technique AdResS and allows for the space‐dependent change of molecular resolution from a path integral representation with 120 degrees of freedom to a point particle that does not interact with other molecules and vice versa. The method is applied to liquid water and implies a sizable gain regarding the request of computational resources compared to full path integral simulations. Given the role of water as universal solvent with a specific hydrogen bonding network, the path integral treatment of water molecules is important to describe the quantum effects of hydrogen atoms’ delocalization in space on the hydrogen bonding network. The method presented here implies feasible computational efforts compared to full path integral simulations of liquid water which, on large scales, are often prohibitive. John Wiley and Sons Inc. 2022-02-25 /pmc/articles/PMC8973269/ /pubmed/35218165 http://dx.doi.org/10.1002/open.202100286 Text en © 2022 The Authors. Published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Articles Evangelakis, Antonios Panahian Jand, Sara Delle Site, Luigi Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir |
title | Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir |
title_full | Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir |
title_fullStr | Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir |
title_full_unstemmed | Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir |
title_short | Path Integral Molecular Dynamics of Liquid Water in a Mean‐Field Particle Reservoir |
title_sort | path integral molecular dynamics of liquid water in a mean‐field particle reservoir |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8973269/ https://www.ncbi.nlm.nih.gov/pubmed/35218165 http://dx.doi.org/10.1002/open.202100286 |
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