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Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer
The EIF3 gene family is essential in controlling translation initiation during the cell cycle. The significance of the EIF3 subunits as prognostic markers and therapeutic targets in breast cancer is not yet clear. We analyzed the expression of EIF3 subunits in breast cancer on the GEPIA and Oncomine...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8974155/ https://www.ncbi.nlm.nih.gov/pubmed/35040374 http://dx.doi.org/10.1080/21655979.2021.2017567 |
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author | Song, Shaoran Liu, Jie Zhang, Miao Gao, Xiaoqian Sun, Wei Liu, Peijun Wang, Yaochun Li, Juan |
author_facet | Song, Shaoran Liu, Jie Zhang, Miao Gao, Xiaoqian Sun, Wei Liu, Peijun Wang, Yaochun Li, Juan |
author_sort | Song, Shaoran |
collection | PubMed |
description | The EIF3 gene family is essential in controlling translation initiation during the cell cycle. The significance of the EIF3 subunits as prognostic markers and therapeutic targets in breast cancer is not yet clear. We analyzed the expression of EIF3 subunits in breast cancer on the GEPIA and Oncomine databases and compared their expression in breast cancer and normal tissues using BRCA data downloaded from TCGA. Then we performed clinical survival analysis on the Kaplan–Meier Plotter database and clinicopathologic analysis on the bc-genexMiner v4.1 database. And EIF3B was chosen for mutation analysis via the Cancer SEA online tool. Meanwhile, we performed the immunohistochemical assay, real-time RT-PCR, and Western blotting to analyze EIF3B expression levels in breast cancer. An EIF3B knockdown and a negative control cell line were conducted for MTT assay and cell cycle analysis to assess cell growth. Specifically, the results of TCGA and online databases demonstrated that upregulated EIF3B was associated with poorer overall and advanced tumor progression. We also confirmed that EIF3B was more highly expressed in breast cancer cells and tissues than normal and correlated with a worse outcome. And knockdown of EIF3B expression inhibited the cell cycle and proliferation. Furthermore, EIF3B was highly mutated in breast cancer. Collectively, our results suggested EIF3B as a potential prognostic marker and therapeutic target for breast cancer. |
format | Online Article Text |
id | pubmed-8974155 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-89741552022-04-02 Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer Song, Shaoran Liu, Jie Zhang, Miao Gao, Xiaoqian Sun, Wei Liu, Peijun Wang, Yaochun Li, Juan Bioengineered Research Paper The EIF3 gene family is essential in controlling translation initiation during the cell cycle. The significance of the EIF3 subunits as prognostic markers and therapeutic targets in breast cancer is not yet clear. We analyzed the expression of EIF3 subunits in breast cancer on the GEPIA and Oncomine databases and compared their expression in breast cancer and normal tissues using BRCA data downloaded from TCGA. Then we performed clinical survival analysis on the Kaplan–Meier Plotter database and clinicopathologic analysis on the bc-genexMiner v4.1 database. And EIF3B was chosen for mutation analysis via the Cancer SEA online tool. Meanwhile, we performed the immunohistochemical assay, real-time RT-PCR, and Western blotting to analyze EIF3B expression levels in breast cancer. An EIF3B knockdown and a negative control cell line were conducted for MTT assay and cell cycle analysis to assess cell growth. Specifically, the results of TCGA and online databases demonstrated that upregulated EIF3B was associated with poorer overall and advanced tumor progression. We also confirmed that EIF3B was more highly expressed in breast cancer cells and tissues than normal and correlated with a worse outcome. And knockdown of EIF3B expression inhibited the cell cycle and proliferation. Furthermore, EIF3B was highly mutated in breast cancer. Collectively, our results suggested EIF3B as a potential prognostic marker and therapeutic target for breast cancer. Taylor & Francis 2022-01-18 /pmc/articles/PMC8974155/ /pubmed/35040374 http://dx.doi.org/10.1080/21655979.2021.2017567 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Song, Shaoran Liu, Jie Zhang, Miao Gao, Xiaoqian Sun, Wei Liu, Peijun Wang, Yaochun Li, Juan Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer |
title | Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer |
title_full | Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer |
title_fullStr | Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer |
title_full_unstemmed | Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer |
title_short | Eukaryotic translation initiation factor 3 subunit B could serve as a potential prognostic predictor for breast cancer |
title_sort | eukaryotic translation initiation factor 3 subunit b could serve as a potential prognostic predictor for breast cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8974155/ https://www.ncbi.nlm.nih.gov/pubmed/35040374 http://dx.doi.org/10.1080/21655979.2021.2017567 |
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