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Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium
The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) can target cardiomyocytes (CMs) to directly invade the heart resulting in high mortality. This study aims to explore the biological characteristics of SARS-CoV-2 infected myocardium based on omics by collecting transcriptome data and a...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8974226/ https://www.ncbi.nlm.nih.gov/pubmed/35037831 http://dx.doi.org/10.1080/21655979.2021.2014621 |
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author | Zhang, Rui Chen, Xi Zuo, Wenjie Ji, Zhenjun Qu, Yangyang Su, Yamin Yang, Mingming Zuo, Pengfei Ma, Genshan Li, Yongjun |
author_facet | Zhang, Rui Chen, Xi Zuo, Wenjie Ji, Zhenjun Qu, Yangyang Su, Yamin Yang, Mingming Zuo, Pengfei Ma, Genshan Li, Yongjun |
author_sort | Zhang, Rui |
collection | PubMed |
description | The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) can target cardiomyocytes (CMs) to directly invade the heart resulting in high mortality. This study aims to explore the biological characteristics of SARS-CoV-2 infected myocardium based on omics by collecting transcriptome data and analyzing them with a series of bioinformatics tools. Totally, 86 differentially expressed genes (DEGs) were discovered in SARS-CoV-2 infected CMs, and 15 miRNAs were discovered to target 60 genes. Functional enrichment analysis indicated that these DEGs were mainly enriched in the inflammatory signaling pathway. After the protein-protein interaction (PPI) network was constructed, several genes including CCL2 and CXCL8 were regarded as the hub genes. SRC inhibitor saracatinib was predicted to potentially act against the cardiac dysfunction induced by SARS-CoV-2. Among the 86 DEGs, 28 were validated to be dysregulated in SARS-CoV-2 infected hearts. Gene Set Enrichment Analysis (GSEA) analysis of Kyoto Encyclopedia of Genes and Genomes (KEGG) showed that malaria, IL-17 signaling pathway, and complement and coagulation cascades were significantly enriched. Immune infiltration analysis indicated that ‘naive B cells’ was significantly increased in the SARS-CoV-2 infected heart. The above results may help to improve the prognosis of patients with COVID-19. |
format | Online Article Text |
id | pubmed-8974226 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-89742262022-04-02 Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium Zhang, Rui Chen, Xi Zuo, Wenjie Ji, Zhenjun Qu, Yangyang Su, Yamin Yang, Mingming Zuo, Pengfei Ma, Genshan Li, Yongjun Bioengineered Research Paper The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) can target cardiomyocytes (CMs) to directly invade the heart resulting in high mortality. This study aims to explore the biological characteristics of SARS-CoV-2 infected myocardium based on omics by collecting transcriptome data and analyzing them with a series of bioinformatics tools. Totally, 86 differentially expressed genes (DEGs) were discovered in SARS-CoV-2 infected CMs, and 15 miRNAs were discovered to target 60 genes. Functional enrichment analysis indicated that these DEGs were mainly enriched in the inflammatory signaling pathway. After the protein-protein interaction (PPI) network was constructed, several genes including CCL2 and CXCL8 were regarded as the hub genes. SRC inhibitor saracatinib was predicted to potentially act against the cardiac dysfunction induced by SARS-CoV-2. Among the 86 DEGs, 28 were validated to be dysregulated in SARS-CoV-2 infected hearts. Gene Set Enrichment Analysis (GSEA) analysis of Kyoto Encyclopedia of Genes and Genomes (KEGG) showed that malaria, IL-17 signaling pathway, and complement and coagulation cascades were significantly enriched. Immune infiltration analysis indicated that ‘naive B cells’ was significantly increased in the SARS-CoV-2 infected heart. The above results may help to improve the prognosis of patients with COVID-19. Taylor & Francis 2022-01-17 /pmc/articles/PMC8974226/ /pubmed/35037831 http://dx.doi.org/10.1080/21655979.2021.2014621 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Zhang, Rui Chen, Xi Zuo, Wenjie Ji, Zhenjun Qu, Yangyang Su, Yamin Yang, Mingming Zuo, Pengfei Ma, Genshan Li, Yongjun Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium |
title | Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium |
title_full | Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium |
title_fullStr | Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium |
title_full_unstemmed | Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium |
title_short | Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium |
title_sort | inflammatory activation and immune cell infiltration are main biological characteristics of sars-cov-2 infected myocardium |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8974226/ https://www.ncbi.nlm.nih.gov/pubmed/35037831 http://dx.doi.org/10.1080/21655979.2021.2014621 |
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