Cargando…

Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy

BACKGROUND: The aim of our study was to evaluate the potential of expression and single nucleotide polymorphism of Acyl-CoA binding domain containing 4 (ACBD4) gene as prognosis biomarkers in patients with hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC) after hepatectomy. METHODS: HBV...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Huasheng, Liao, Xiwen, Zhu, Guangzhi, Han, Chuangye, Wang, Xiangkun, Yang, Chengkun, Zhou, Xin, Liang, Tianyi, Huang, Ketuan, Peng, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8976523/
https://www.ncbi.nlm.nih.gov/pubmed/35378899
http://dx.doi.org/10.2147/PGPM.S349350
_version_ 1784680588283740160
author Huang, Huasheng
Liao, Xiwen
Zhu, Guangzhi
Han, Chuangye
Wang, Xiangkun
Yang, Chengkun
Zhou, Xin
Liang, Tianyi
Huang, Ketuan
Peng, Tao
author_facet Huang, Huasheng
Liao, Xiwen
Zhu, Guangzhi
Han, Chuangye
Wang, Xiangkun
Yang, Chengkun
Zhou, Xin
Liang, Tianyi
Huang, Ketuan
Peng, Tao
author_sort Huang, Huasheng
collection PubMed
description BACKGROUND: The aim of our study was to evaluate the potential of expression and single nucleotide polymorphism of Acyl-CoA binding domain containing 4 (ACBD4) gene as prognosis biomarkers in patients with hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC) after hepatectomy. METHODS: HBV-related HCC patients from the First Affiliated Hospital of Guangxi Medical University and GSE14520 were included in the current study, as well as The Cancer Genome Atlas (TCGA) HCC verification cohort. Prognostic analysis and multiple functional enrichment analysis methods were used to evaluate the prognostic value and potential biological functions of the ACBD4 gene in HBV-related HCC. RESULTS: We found that ACBD4 gene is highly expressed in normal liver tissues and markedly down-regulated in HBV-related HCC tissues. ACBD4 gene was significantly related to overall survival (OS) of HCC in TCGA and GSE14520 cohorts, and patients with low ACBD4 expression were markedly related to poor OS. Rs4986172 was observed as an OS biomarker after hepatectomy in the Guangxi HBV-related HCC cohort. The OS of rs4986172 GG genotype was worse than that of HCC patients with A allele (AA and AG genotypes). Multifunctional enrichment analysis suggested that ACBD4 gene is closely related to the metabolic, peroxisome proliferator-activated receptor and cytochrome P450 pathway. Through connectivity map, we also identified eight compounds that may be used as targeted therapeutic agents for ACBD4 gene in HBV-related HCC; these compounds were scopoletin, alfaxalone, bephenium hydroxynaphthoate, apramycin, 4,5-dianilinophthalimide, DL-thiorphan, aminohippuric acid and quinidine. Immune microenvironment analysis revealed that there were significant differences in immune scores of HBV-related HCC tumor tissues with different ACBD4 expression levels. CONCLUSION: Our study reveals that ACBD4 expression and rs4986172 can be serve as biomarkers of OS in HBV-related HCC patients after hepatectomy.
format Online
Article
Text
id pubmed-8976523
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Dove
record_format MEDLINE/PubMed
spelling pubmed-89765232022-04-03 Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy Huang, Huasheng Liao, Xiwen Zhu, Guangzhi Han, Chuangye Wang, Xiangkun Yang, Chengkun Zhou, Xin Liang, Tianyi Huang, Ketuan Peng, Tao Pharmgenomics Pers Med Original Research BACKGROUND: The aim of our study was to evaluate the potential of expression and single nucleotide polymorphism of Acyl-CoA binding domain containing 4 (ACBD4) gene as prognosis biomarkers in patients with hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC) after hepatectomy. METHODS: HBV-related HCC patients from the First Affiliated Hospital of Guangxi Medical University and GSE14520 were included in the current study, as well as The Cancer Genome Atlas (TCGA) HCC verification cohort. Prognostic analysis and multiple functional enrichment analysis methods were used to evaluate the prognostic value and potential biological functions of the ACBD4 gene in HBV-related HCC. RESULTS: We found that ACBD4 gene is highly expressed in normal liver tissues and markedly down-regulated in HBV-related HCC tissues. ACBD4 gene was significantly related to overall survival (OS) of HCC in TCGA and GSE14520 cohorts, and patients with low ACBD4 expression were markedly related to poor OS. Rs4986172 was observed as an OS biomarker after hepatectomy in the Guangxi HBV-related HCC cohort. The OS of rs4986172 GG genotype was worse than that of HCC patients with A allele (AA and AG genotypes). Multifunctional enrichment analysis suggested that ACBD4 gene is closely related to the metabolic, peroxisome proliferator-activated receptor and cytochrome P450 pathway. Through connectivity map, we also identified eight compounds that may be used as targeted therapeutic agents for ACBD4 gene in HBV-related HCC; these compounds were scopoletin, alfaxalone, bephenium hydroxynaphthoate, apramycin, 4,5-dianilinophthalimide, DL-thiorphan, aminohippuric acid and quinidine. Immune microenvironment analysis revealed that there were significant differences in immune scores of HBV-related HCC tumor tissues with different ACBD4 expression levels. CONCLUSION: Our study reveals that ACBD4 expression and rs4986172 can be serve as biomarkers of OS in HBV-related HCC patients after hepatectomy. Dove 2022-03-29 /pmc/articles/PMC8976523/ /pubmed/35378899 http://dx.doi.org/10.2147/PGPM.S349350 Text en © 2022 Huang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Huang, Huasheng
Liao, Xiwen
Zhu, Guangzhi
Han, Chuangye
Wang, Xiangkun
Yang, Chengkun
Zhou, Xin
Liang, Tianyi
Huang, Ketuan
Peng, Tao
Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy
title Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy
title_full Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy
title_fullStr Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy
title_full_unstemmed Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy
title_short Acyl-CoA Binding Domain Containing 4 Polymorphism rs4986172 and Expression Can Serve as Overall Survival Biomarkers for Hepatitis B Virus-Related Hepatocellular Carcinoma Patients After Hepatectomy
title_sort acyl-coa binding domain containing 4 polymorphism rs4986172 and expression can serve as overall survival biomarkers for hepatitis b virus-related hepatocellular carcinoma patients after hepatectomy
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8976523/
https://www.ncbi.nlm.nih.gov/pubmed/35378899
http://dx.doi.org/10.2147/PGPM.S349350
work_keys_str_mv AT huanghuasheng acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT liaoxiwen acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT zhuguangzhi acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT hanchuangye acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT wangxiangkun acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT yangchengkun acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT zhouxin acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT liangtianyi acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT huangketuan acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy
AT pengtao acylcoabindingdomaincontaining4polymorphismrs4986172andexpressioncanserveasoverallsurvivalbiomarkersforhepatitisbvirusrelatedhepatocellularcarcinomapatientsafterhepatectomy