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Magnetically Induced Current Densities in Zinc Porphyrin Nanoshells
[Image: see text] The molecular structures of porphyrinoid cages were obtained by constructing small polyhedral graphs whose vertices have degree-4. The initial structures were then fully optimized at the density functional theory (DFT) level using the generalized gradient approximation. Some of pol...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8978182/ https://www.ncbi.nlm.nih.gov/pubmed/35302768 http://dx.doi.org/10.1021/acs.jpca.1c10815 |
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author | Mahmood, Atif Dimitrova, Maria Wirz, Lukas N. Sundholm, Dage |
author_facet | Mahmood, Atif Dimitrova, Maria Wirz, Lukas N. Sundholm, Dage |
author_sort | Mahmood, Atif |
collection | PubMed |
description | [Image: see text] The molecular structures of porphyrinoid cages were obtained by constructing small polyhedral graphs whose vertices have degree-4. The initial structures were then fully optimized at the density functional theory (DFT) level using the generalized gradient approximation. Some of polyhedral vertices were replaced with Zn–porphyrin units and their edges were replaced with ethyne or butadiyne bridges or connected by fusing two neighboring Zn–porphyrin units. Molecule 1 is an ethyne-bridge porphyrinoid nanotube, whose ends are sealed with a Zn–porphyrin. Molecule 2 is the corresponding open porphyrinoid nanotube. Molecule 3 is a clam-like porphyrinoid cage, whose shells consist of fused Zn–porphyrins, and the two halves are connected via butadiyne bridges. Molecule 4 is a cross-belt of fused Zn–porphyrins, and molecule 5 is a cross-belt of Zn–porphyrins connected with butadiyne bridges. The magnetically induced current density of the optimized porphyrinoid cages was calculated for determining the aromatic character, the degree of aromaticity and the current-density pathways. The current-density calculations were performed at the DFT level with the gauge—including magnetically induced currents (GIMIC) method using the B3LYP hybrid functional and def2-SVP basis sets. Calculations of the current densities show that molecule 2 sustains a paratropic ring current around the nanotube, whereas sealing the ends as in molecule 1 leads to an almost nonaromatic nanotube. Fusing porphyrinoids as in molecules 3 and 4 results in complicated current-density pathways that differ from the ones usually appearing in porphyrinoids. The aromatic character of molecules 4 and 5 changes upon oxidation. The neutral molecule 4 is antiaromatic, whereas the dication is nonaromatic. Molecule 5 is nonaromatic, and its dication is aromatic. |
format | Online Article Text |
id | pubmed-8978182 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-89781822022-04-05 Magnetically Induced Current Densities in Zinc Porphyrin Nanoshells Mahmood, Atif Dimitrova, Maria Wirz, Lukas N. Sundholm, Dage J Phys Chem A [Image: see text] The molecular structures of porphyrinoid cages were obtained by constructing small polyhedral graphs whose vertices have degree-4. The initial structures were then fully optimized at the density functional theory (DFT) level using the generalized gradient approximation. Some of polyhedral vertices were replaced with Zn–porphyrin units and their edges were replaced with ethyne or butadiyne bridges or connected by fusing two neighboring Zn–porphyrin units. Molecule 1 is an ethyne-bridge porphyrinoid nanotube, whose ends are sealed with a Zn–porphyrin. Molecule 2 is the corresponding open porphyrinoid nanotube. Molecule 3 is a clam-like porphyrinoid cage, whose shells consist of fused Zn–porphyrins, and the two halves are connected via butadiyne bridges. Molecule 4 is a cross-belt of fused Zn–porphyrins, and molecule 5 is a cross-belt of Zn–porphyrins connected with butadiyne bridges. The magnetically induced current density of the optimized porphyrinoid cages was calculated for determining the aromatic character, the degree of aromaticity and the current-density pathways. The current-density calculations were performed at the DFT level with the gauge—including magnetically induced currents (GIMIC) method using the B3LYP hybrid functional and def2-SVP basis sets. Calculations of the current densities show that molecule 2 sustains a paratropic ring current around the nanotube, whereas sealing the ends as in molecule 1 leads to an almost nonaromatic nanotube. Fusing porphyrinoids as in molecules 3 and 4 results in complicated current-density pathways that differ from the ones usually appearing in porphyrinoids. The aromatic character of molecules 4 and 5 changes upon oxidation. The neutral molecule 4 is antiaromatic, whereas the dication is nonaromatic. Molecule 5 is nonaromatic, and its dication is aromatic. American Chemical Society 2022-03-18 2022-03-31 /pmc/articles/PMC8978182/ /pubmed/35302768 http://dx.doi.org/10.1021/acs.jpca.1c10815 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Mahmood, Atif Dimitrova, Maria Wirz, Lukas N. Sundholm, Dage Magnetically Induced Current Densities in Zinc Porphyrin Nanoshells |
title | Magnetically Induced Current Densities in Zinc Porphyrin
Nanoshells |
title_full | Magnetically Induced Current Densities in Zinc Porphyrin
Nanoshells |
title_fullStr | Magnetically Induced Current Densities in Zinc Porphyrin
Nanoshells |
title_full_unstemmed | Magnetically Induced Current Densities in Zinc Porphyrin
Nanoshells |
title_short | Magnetically Induced Current Densities in Zinc Porphyrin
Nanoshells |
title_sort | magnetically induced current densities in zinc porphyrin
nanoshells |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8978182/ https://www.ncbi.nlm.nih.gov/pubmed/35302768 http://dx.doi.org/10.1021/acs.jpca.1c10815 |
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