The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China

Actinidia chinensis Planch. ‘Hongyang’ Wu and Li 1993, also known as red-fleshed kiwifruit, has a high vitamin C content and with high economic and nutritional value. Here, we assembled the complete chloroplast genome of A. chinensis Planch. ‘Hongyang’, which was 156,267 bp in length, contained a la...

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Autores principales: Liu, Xia, Sun, Chong, Li, Mingzhi, Liu, Jing, Zhang, Wenlin, Liu, Ran, Liu, Yiqing, Le, Youzhang, Lan, Jianbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979500/
https://www.ncbi.nlm.nih.gov/pubmed/35386637
http://dx.doi.org/10.1080/23802359.2022.2057249
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author Liu, Xia
Sun, Chong
Li, Mingzhi
Liu, Jing
Zhang, Wenlin
Liu, Ran
Liu, Yiqing
Le, Youzhang
Lan, Jianbin
author_facet Liu, Xia
Sun, Chong
Li, Mingzhi
Liu, Jing
Zhang, Wenlin
Liu, Ran
Liu, Yiqing
Le, Youzhang
Lan, Jianbin
author_sort Liu, Xia
collection PubMed
description Actinidia chinensis Planch. ‘Hongyang’ Wu and Li 1993, also known as red-fleshed kiwifruit, has a high vitamin C content and with high economic and nutritional value. Here, we assembled the complete chloroplast genome of A. chinensis Planch. ‘Hongyang’, which was 156,267 bp in length, contained a large single-copy region (LSC) of 87,866 bp, a small single-copy region (SSC) of 20,335 bp, and two inverted repeat (IR) regions of 24,033 bp. In addition, the chloroplast genome contained 132 genes, including 85 protein-coding, 39 tRNA, and eight rRNA genes. Overall GC content in the genome was 37.2%, with the corresponding values in the LSC, SSC, and IR regions of 35.5%, 31.1%, and 42.9%, respectively. Phylogenetic analysis indicated that A. chinensis Planch. ‘Hongyang’ was clustered with that of A. callosa var. strigillosa, A. deliciosa, A. melanandra, A. chinensis and A. setosa in the same branch.
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spelling pubmed-89795002022-04-05 The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China Liu, Xia Sun, Chong Li, Mingzhi Liu, Jing Zhang, Wenlin Liu, Ran Liu, Yiqing Le, Youzhang Lan, Jianbin Mitochondrial DNA B Resour Mitogenome Announcement Actinidia chinensis Planch. ‘Hongyang’ Wu and Li 1993, also known as red-fleshed kiwifruit, has a high vitamin C content and with high economic and nutritional value. Here, we assembled the complete chloroplast genome of A. chinensis Planch. ‘Hongyang’, which was 156,267 bp in length, contained a large single-copy region (LSC) of 87,866 bp, a small single-copy region (SSC) of 20,335 bp, and two inverted repeat (IR) regions of 24,033 bp. In addition, the chloroplast genome contained 132 genes, including 85 protein-coding, 39 tRNA, and eight rRNA genes. Overall GC content in the genome was 37.2%, with the corresponding values in the LSC, SSC, and IR regions of 35.5%, 31.1%, and 42.9%, respectively. Phylogenetic analysis indicated that A. chinensis Planch. ‘Hongyang’ was clustered with that of A. callosa var. strigillosa, A. deliciosa, A. melanandra, A. chinensis and A. setosa in the same branch. Taylor & Francis 2022-04-01 /pmc/articles/PMC8979500/ /pubmed/35386637 http://dx.doi.org/10.1080/23802359.2022.2057249 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Xia
Sun, Chong
Li, Mingzhi
Liu, Jing
Zhang, Wenlin
Liu, Ran
Liu, Yiqing
Le, Youzhang
Lan, Jianbin
The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China
title The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China
title_full The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China
title_fullStr The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China
title_full_unstemmed The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China
title_short The complete chloroplast genome sequence of Actinidia chinensis Planch. ‘Hongyang’, a typical red core pulp in China
title_sort complete chloroplast genome sequence of actinidia chinensis planch. ‘hongyang’, a typical red core pulp in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979500/
https://www.ncbi.nlm.nih.gov/pubmed/35386637
http://dx.doi.org/10.1080/23802359.2022.2057249
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