The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position

Cynanchum chinense R. Br. is an indigenous Chinese medicinal herb. In this study, the complete chloroplast genome of C. chinense was reported for the first time. The genome was 158,615 bp in length, with a large single-copy region of 89,958 bp, a small single-copy region of 19,415 bp, and 2 inverted...

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Detalles Bibliográficos
Autores principales: Chen, Guodong, Zhang, Xue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979503/
https://www.ncbi.nlm.nih.gov/pubmed/35386634
http://dx.doi.org/10.1080/23802359.2021.1959434
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author Chen, Guodong
Zhang, Xue
author_facet Chen, Guodong
Zhang, Xue
author_sort Chen, Guodong
collection PubMed
description Cynanchum chinense R. Br. is an indigenous Chinese medicinal herb. In this study, the complete chloroplast genome of C. chinense was reported for the first time. The genome was 158,615 bp in length, with a large single-copy region of 89,958 bp, a small single-copy region of 19,415 bp, and 2 inverted repeat regions of 24,621 bp. The genome consisted of 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 37.82%. Phylogenetic analysis based on 21 complete genomes indicated that C. chinense is most closely related to Cynanchum auriculatum and Cynanchum wilfordii.
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spelling pubmed-89795032022-04-05 The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position Chen, Guodong Zhang, Xue Mitochondrial DNA B Resour Mitogenome Announcement Cynanchum chinense R. Br. is an indigenous Chinese medicinal herb. In this study, the complete chloroplast genome of C. chinense was reported for the first time. The genome was 158,615 bp in length, with a large single-copy region of 89,958 bp, a small single-copy region of 19,415 bp, and 2 inverted repeat regions of 24,621 bp. The genome consisted of 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 37.82%. Phylogenetic analysis based on 21 complete genomes indicated that C. chinense is most closely related to Cynanchum auriculatum and Cynanchum wilfordii. Taylor & Francis 2022-04-01 /pmc/articles/PMC8979503/ /pubmed/35386634 http://dx.doi.org/10.1080/23802359.2021.1959434 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chen, Guodong
Zhang, Xue
The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position
title The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position
title_full The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position
title_fullStr The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position
title_full_unstemmed The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position
title_short The complete chloroplast genome of Chinese medicinal herb Cynanchum chinense R. Br. (Apocynaceae) and its phylogenetic position
title_sort complete chloroplast genome of chinese medicinal herb cynanchum chinense r. br. (apocynaceae) and its phylogenetic position
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979503/
https://www.ncbi.nlm.nih.gov/pubmed/35386634
http://dx.doi.org/10.1080/23802359.2021.1959434
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