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The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)

Pomadasys kaakan (Cuvier 1830) is a fish found in coastal waters that is widely distributed in the Western Indo-Pacific Ocean and plays an important role in commercial fisheries. The complete mitochondrial genome of P. kaakan was determined for the first time in this study. The genome was 16,808 bp...

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Autores principales: Chen, Ming, Yang, Jieluan, He, Haobin, Chen, Yupei, Chen, Zhenhan, Liang, Rishen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979522/
https://www.ncbi.nlm.nih.gov/pubmed/35386633
http://dx.doi.org/10.1080/23802359.2021.1993458
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author Chen, Ming
Yang, Jieluan
He, Haobin
Chen, Yupei
Chen, Zhenhan
Liang, Rishen
author_facet Chen, Ming
Yang, Jieluan
He, Haobin
Chen, Yupei
Chen, Zhenhan
Liang, Rishen
author_sort Chen, Ming
collection PubMed
description Pomadasys kaakan (Cuvier 1830) is a fish found in coastal waters that is widely distributed in the Western Indo-Pacific Ocean and plays an important role in commercial fisheries. The complete mitochondrial genome of P. kaakan was determined for the first time in this study. The genome was 16,808 bp in length and consisted of 13 protein coding genes, 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and one noncoding control region. The overall base composition was estimated to be A: 27.1%; T: 24.7%; C: 31.7%; and G: 16.5%, with an AT bias of 51.8%. Molecular phylogenetic analysis suggested that P. kaakan was clustered with species of genera Plectorhinchus, Diagramma, and Parapristipoma, which also belonged to the Haemulidae family. Furthermore, the Haemulidae family was closely related to the group containing Oplegnathidae, Kyphosidae, Teraponidae, and Lutjanidae. These results may provide molecular information for the species evolution and phylogenetic status of P. kaakan in the suborder Percoidei.
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spelling pubmed-89795222022-04-05 The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) Chen, Ming Yang, Jieluan He, Haobin Chen, Yupei Chen, Zhenhan Liang, Rishen Mitochondrial DNA B Resour Mitogenome Announcement Pomadasys kaakan (Cuvier 1830) is a fish found in coastal waters that is widely distributed in the Western Indo-Pacific Ocean and plays an important role in commercial fisheries. The complete mitochondrial genome of P. kaakan was determined for the first time in this study. The genome was 16,808 bp in length and consisted of 13 protein coding genes, 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and one noncoding control region. The overall base composition was estimated to be A: 27.1%; T: 24.7%; C: 31.7%; and G: 16.5%, with an AT bias of 51.8%. Molecular phylogenetic analysis suggested that P. kaakan was clustered with species of genera Plectorhinchus, Diagramma, and Parapristipoma, which also belonged to the Haemulidae family. Furthermore, the Haemulidae family was closely related to the group containing Oplegnathidae, Kyphosidae, Teraponidae, and Lutjanidae. These results may provide molecular information for the species evolution and phylogenetic status of P. kaakan in the suborder Percoidei. Taylor & Francis 2022-04-01 /pmc/articles/PMC8979522/ /pubmed/35386633 http://dx.doi.org/10.1080/23802359.2021.1993458 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chen, Ming
Yang, Jieluan
He, Haobin
Chen, Yupei
Chen, Zhenhan
Liang, Rishen
The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)
title The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)
title_full The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)
title_fullStr The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)
title_full_unstemmed The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)
title_short The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)
title_sort complete mitochondrial genome of pomadasys kaakan (perciformes: haemulidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979522/
https://www.ncbi.nlm.nih.gov/pubmed/35386633
http://dx.doi.org/10.1080/23802359.2021.1993458
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