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The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae)
Pomadasys kaakan (Cuvier 1830) is a fish found in coastal waters that is widely distributed in the Western Indo-Pacific Ocean and plays an important role in commercial fisheries. The complete mitochondrial genome of P. kaakan was determined for the first time in this study. The genome was 16,808 bp...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979522/ https://www.ncbi.nlm.nih.gov/pubmed/35386633 http://dx.doi.org/10.1080/23802359.2021.1993458 |
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author | Chen, Ming Yang, Jieluan He, Haobin Chen, Yupei Chen, Zhenhan Liang, Rishen |
author_facet | Chen, Ming Yang, Jieluan He, Haobin Chen, Yupei Chen, Zhenhan Liang, Rishen |
author_sort | Chen, Ming |
collection | PubMed |
description | Pomadasys kaakan (Cuvier 1830) is a fish found in coastal waters that is widely distributed in the Western Indo-Pacific Ocean and plays an important role in commercial fisheries. The complete mitochondrial genome of P. kaakan was determined for the first time in this study. The genome was 16,808 bp in length and consisted of 13 protein coding genes, 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and one noncoding control region. The overall base composition was estimated to be A: 27.1%; T: 24.7%; C: 31.7%; and G: 16.5%, with an AT bias of 51.8%. Molecular phylogenetic analysis suggested that P. kaakan was clustered with species of genera Plectorhinchus, Diagramma, and Parapristipoma, which also belonged to the Haemulidae family. Furthermore, the Haemulidae family was closely related to the group containing Oplegnathidae, Kyphosidae, Teraponidae, and Lutjanidae. These results may provide molecular information for the species evolution and phylogenetic status of P. kaakan in the suborder Percoidei. |
format | Online Article Text |
id | pubmed-8979522 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-89795222022-04-05 The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) Chen, Ming Yang, Jieluan He, Haobin Chen, Yupei Chen, Zhenhan Liang, Rishen Mitochondrial DNA B Resour Mitogenome Announcement Pomadasys kaakan (Cuvier 1830) is a fish found in coastal waters that is widely distributed in the Western Indo-Pacific Ocean and plays an important role in commercial fisheries. The complete mitochondrial genome of P. kaakan was determined for the first time in this study. The genome was 16,808 bp in length and consisted of 13 protein coding genes, 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and one noncoding control region. The overall base composition was estimated to be A: 27.1%; T: 24.7%; C: 31.7%; and G: 16.5%, with an AT bias of 51.8%. Molecular phylogenetic analysis suggested that P. kaakan was clustered with species of genera Plectorhinchus, Diagramma, and Parapristipoma, which also belonged to the Haemulidae family. Furthermore, the Haemulidae family was closely related to the group containing Oplegnathidae, Kyphosidae, Teraponidae, and Lutjanidae. These results may provide molecular information for the species evolution and phylogenetic status of P. kaakan in the suborder Percoidei. Taylor & Francis 2022-04-01 /pmc/articles/PMC8979522/ /pubmed/35386633 http://dx.doi.org/10.1080/23802359.2021.1993458 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Chen, Ming Yang, Jieluan He, Haobin Chen, Yupei Chen, Zhenhan Liang, Rishen The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) |
title | The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) |
title_full | The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) |
title_fullStr | The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) |
title_full_unstemmed | The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) |
title_short | The complete mitochondrial genome of Pomadasys kaakan (Perciformes: Haemulidae) |
title_sort | complete mitochondrial genome of pomadasys kaakan (perciformes: haemulidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979522/ https://www.ncbi.nlm.nih.gov/pubmed/35386633 http://dx.doi.org/10.1080/23802359.2021.1993458 |
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