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Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images

Histopathological images contain morphological markers of disease progression that have diagnostic and predictive values, with many computer-aided diagnosis systems using common deep learning methods that have been proposed to save time and labour. Even though deep learning methods are an end-to-end...

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Autores principales: Cai, Jianxiu, Liu, Manting, Zhang, Qi, Shao, Ziqi, Zhou, Jingwen, Guo, Yongjian, Liu, Juan, Wang, Xiaobin, Zhang, Bob, Li, Xi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979690/
https://www.ncbi.nlm.nih.gov/pubmed/35386304
http://dx.doi.org/10.1155/2022/9821773
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author Cai, Jianxiu
Liu, Manting
Zhang, Qi
Shao, Ziqi
Zhou, Jingwen
Guo, Yongjian
Liu, Juan
Wang, Xiaobin
Zhang, Bob
Li, Xi
author_facet Cai, Jianxiu
Liu, Manting
Zhang, Qi
Shao, Ziqi
Zhou, Jingwen
Guo, Yongjian
Liu, Juan
Wang, Xiaobin
Zhang, Bob
Li, Xi
author_sort Cai, Jianxiu
collection PubMed
description Histopathological images contain morphological markers of disease progression that have diagnostic and predictive values, with many computer-aided diagnosis systems using common deep learning methods that have been proposed to save time and labour. Even though deep learning methods are an end-to-end method, they perform exceptionally well given a large dataset and often show relatively inferior results for a small dataset. In contrast, traditional feature extraction methods have greater robustness and perform well with a small/medium dataset. Moreover, a texture representation-based global approach is commonly used to classify histological tissue images expect in explicit segmentation to extract the structure properties. Considering the scarcity of medical datasets and the usefulness of texture representation, we would like to integrate both the advantages of deep learning and traditional machine learning, i.e., texture representation. To accomplish this task, we proposed a classification model to detect renal cancer using a histopathology dataset by fusing the features from a deep learning model with the extracted texture feature descriptors. Here, five texture feature descriptors from three texture feature families were applied to complement Alex-Net for the extensive validation of the fusion between the deep features and texture features. The texture features are from (1) statistic feature family: histogram of gradient, gray-level cooccurrence matrix, and local binary pattern; (2) transform-based texture feature family: Gabor filters; and (3) model-based texture feature family: Markov random field. The final experimental results for classification outperformed both Alex-Net and a singular texture descriptor, showing the effectiveness of combining the deep features and texture features in renal cancer detection.
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spelling pubmed-89796902022-04-05 Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images Cai, Jianxiu Liu, Manting Zhang, Qi Shao, Ziqi Zhou, Jingwen Guo, Yongjian Liu, Juan Wang, Xiaobin Zhang, Bob Li, Xi Biomed Res Int Research Article Histopathological images contain morphological markers of disease progression that have diagnostic and predictive values, with many computer-aided diagnosis systems using common deep learning methods that have been proposed to save time and labour. Even though deep learning methods are an end-to-end method, they perform exceptionally well given a large dataset and often show relatively inferior results for a small dataset. In contrast, traditional feature extraction methods have greater robustness and perform well with a small/medium dataset. Moreover, a texture representation-based global approach is commonly used to classify histological tissue images expect in explicit segmentation to extract the structure properties. Considering the scarcity of medical datasets and the usefulness of texture representation, we would like to integrate both the advantages of deep learning and traditional machine learning, i.e., texture representation. To accomplish this task, we proposed a classification model to detect renal cancer using a histopathology dataset by fusing the features from a deep learning model with the extracted texture feature descriptors. Here, five texture feature descriptors from three texture feature families were applied to complement Alex-Net for the extensive validation of the fusion between the deep features and texture features. The texture features are from (1) statistic feature family: histogram of gradient, gray-level cooccurrence matrix, and local binary pattern; (2) transform-based texture feature family: Gabor filters; and (3) model-based texture feature family: Markov random field. The final experimental results for classification outperformed both Alex-Net and a singular texture descriptor, showing the effectiveness of combining the deep features and texture features in renal cancer detection. Hindawi 2022-03-28 /pmc/articles/PMC8979690/ /pubmed/35386304 http://dx.doi.org/10.1155/2022/9821773 Text en Copyright © 2022 Jianxiu Cai et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Cai, Jianxiu
Liu, Manting
Zhang, Qi
Shao, Ziqi
Zhou, Jingwen
Guo, Yongjian
Liu, Juan
Wang, Xiaobin
Zhang, Bob
Li, Xi
Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images
title Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images
title_full Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images
title_fullStr Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images
title_full_unstemmed Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images
title_short Renal Cancer Detection: Fusing Deep and Texture Features from Histopathology Images
title_sort renal cancer detection: fusing deep and texture features from histopathology images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979690/
https://www.ncbi.nlm.nih.gov/pubmed/35386304
http://dx.doi.org/10.1155/2022/9821773
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