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A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma

BACKGROUND: Osteosarcoma (OS) is a bone malignancy frequently seen in pediatrics and has high mortality and incidence. Ferroptosis is an important cell death process in regulating the apoptosis and invasion of tumor cells, so constructing the risk-scoring model based on OS ferroptosis-related genes...

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Autores principales: Jiang, Mingyang, Wang, Zifan, He, Xiaoyu, Hu, Yang, Xie, Mingjing, Jike, Yiji, Bo, Zhandong, Qin, Wentao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979715/
https://www.ncbi.nlm.nih.gov/pubmed/35386212
http://dx.doi.org/10.1155/2022/4221756
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author Jiang, Mingyang
Wang, Zifan
He, Xiaoyu
Hu, Yang
Xie, Mingjing
Jike, Yiji
Bo, Zhandong
Qin, Wentao
author_facet Jiang, Mingyang
Wang, Zifan
He, Xiaoyu
Hu, Yang
Xie, Mingjing
Jike, Yiji
Bo, Zhandong
Qin, Wentao
author_sort Jiang, Mingyang
collection PubMed
description BACKGROUND: Osteosarcoma (OS) is a bone malignancy frequently seen in pediatrics and has high mortality and incidence. Ferroptosis is an important cell death process in regulating the apoptosis and invasion of tumor cells, so constructing the risk-scoring model based on OS ferroptosis-related genes (FRGs) will benefit the evaluation of both treatment and prognosis. METHODS: The OS dataset was screened from the Therapeutically Applicable Research to Generate Effective Treatments (TARGET) database, and OS-related FRGs were found through the Ferroptosis Database (FerrDb) using a multivariate Cox regression model, followed by the generation of the risk scores and a risk-scoring prediction model. Further systematical exploration for immune cell infiltration and assessing the prediction of response to targeted drugs was conducted. RESULTS: Based on OS-related FRGs, a risk-scoring model of FRGs in OS was constructed. The six FRGs played a role in the carbon metabolism, glutathione metabolism, and pentose phosphate pathways. Results from targeted drug sensitivity analyses were concordant to pathway analyses. The response to targeted drugs statistically differed between the two groups with different risks, and the high-risk group presented a high sensitivity to targeted drugs. CONCLUSIONS: We identified a 6-ferroptosis-gene-based prognostic signature in OS and created and verified a risk-scoring model to predict the prognosis of OS at 1, 3, and 5 years for OS patients independently.
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spelling pubmed-89797152022-04-05 A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma Jiang, Mingyang Wang, Zifan He, Xiaoyu Hu, Yang Xie, Mingjing Jike, Yiji Bo, Zhandong Qin, Wentao J Oncol Research Article BACKGROUND: Osteosarcoma (OS) is a bone malignancy frequently seen in pediatrics and has high mortality and incidence. Ferroptosis is an important cell death process in regulating the apoptosis and invasion of tumor cells, so constructing the risk-scoring model based on OS ferroptosis-related genes (FRGs) will benefit the evaluation of both treatment and prognosis. METHODS: The OS dataset was screened from the Therapeutically Applicable Research to Generate Effective Treatments (TARGET) database, and OS-related FRGs were found through the Ferroptosis Database (FerrDb) using a multivariate Cox regression model, followed by the generation of the risk scores and a risk-scoring prediction model. Further systematical exploration for immune cell infiltration and assessing the prediction of response to targeted drugs was conducted. RESULTS: Based on OS-related FRGs, a risk-scoring model of FRGs in OS was constructed. The six FRGs played a role in the carbon metabolism, glutathione metabolism, and pentose phosphate pathways. Results from targeted drug sensitivity analyses were concordant to pathway analyses. The response to targeted drugs statistically differed between the two groups with different risks, and the high-risk group presented a high sensitivity to targeted drugs. CONCLUSIONS: We identified a 6-ferroptosis-gene-based prognostic signature in OS and created and verified a risk-scoring model to predict the prognosis of OS at 1, 3, and 5 years for OS patients independently. Hindawi 2022-03-28 /pmc/articles/PMC8979715/ /pubmed/35386212 http://dx.doi.org/10.1155/2022/4221756 Text en Copyright © 2022 Mingyang Jiang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Jiang, Mingyang
Wang, Zifan
He, Xiaoyu
Hu, Yang
Xie, Mingjing
Jike, Yiji
Bo, Zhandong
Qin, Wentao
A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma
title A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma
title_full A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma
title_fullStr A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma
title_full_unstemmed A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma
title_short A Risk-Scoring Model Based on Evaluation of Ferroptosis-Related Genes in Osteosarcoma
title_sort risk-scoring model based on evaluation of ferroptosis-related genes in osteosarcoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979715/
https://www.ncbi.nlm.nih.gov/pubmed/35386212
http://dx.doi.org/10.1155/2022/4221756
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