Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects

This paper presents the analytical and numerical comparison of two methods of estimation of additive × additive × additive (aaa) interaction of QTL effects. The first method takes into account only the plant phenotype, while in the second we also included genotypic information from molecular marker...

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Autores principales: Cyplik, Adrian, Bocianowski, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Plant Genetics • Original Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979904/
https://www.ncbi.nlm.nih.gov/pubmed/34940940
http://dx.doi.org/10.1007/s13353-021-00676-7
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author Cyplik, Adrian
Bocianowski, Jan
author_facet Cyplik, Adrian
Bocianowski, Jan
author_sort Cyplik, Adrian
collection PubMed
description This paper presents the analytical and numerical comparison of two methods of estimation of additive × additive × additive (aaa) interaction of QTL effects. The first method takes into account only the plant phenotype, while in the second we also included genotypic information from molecular marker observation. Analysis was made on 150 doubled haploid (DH) lines of barley derived from cross Steptoe × Morex and 145 DH lines from Harrington × TR306 cross. In total, 153 sets of observation was analyzed. In most cases, aaa interactions were found with an exert effect on QTL. Results also show that with molecular marker observations, obtained estimators had smaller absolute values than phenotypic estimators.
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spelling pubmed-89799042022-04-22 Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects Cyplik, Adrian Bocianowski, Jan J Appl Genet Plant Genetics • Original Paper This paper presents the analytical and numerical comparison of two methods of estimation of additive × additive × additive (aaa) interaction of QTL effects. The first method takes into account only the plant phenotype, while in the second we also included genotypic information from molecular marker observation. Analysis was made on 150 doubled haploid (DH) lines of barley derived from cross Steptoe × Morex and 145 DH lines from Harrington × TR306 cross. In total, 153 sets of observation was analyzed. In most cases, aaa interactions were found with an exert effect on QTL. Results also show that with molecular marker observations, obtained estimators had smaller absolute values than phenotypic estimators. Springer Berlin Heidelberg 2021-12-23 2022 /pmc/articles/PMC8979904/ /pubmed/34940940 http://dx.doi.org/10.1007/s13353-021-00676-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Plant Genetics • Original Paper
Cyplik, Adrian
Bocianowski, Jan
Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects
title Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects
title_full Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects
title_fullStr Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects
title_full_unstemmed Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects
title_short Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects
title_sort analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of qtl effects
topic Plant Genetics • Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8979904/
https://www.ncbi.nlm.nih.gov/pubmed/34940940
http://dx.doi.org/10.1007/s13353-021-00676-7
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