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Oscillator decomposition of infant fNIRS data

The functional near-infrared spectroscopy (fNIRS) can detect hemodynamic responses in the brain and the data consist of bivariate time series of oxygenated hemoglobin (oxy-Hb) and deoxygenated hemoglobin (deoxy-Hb) on each channel. In this study, we investigate oscillatory changes in infant fNIRS si...

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Autores principales: Matsuda, Takeru, Homae, Fumitaka, Watanabe, Hama, Taga, Gentaro, Komaki, Fumiyasu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8982875/
https://www.ncbi.nlm.nih.gov/pubmed/35324896
http://dx.doi.org/10.1371/journal.pcbi.1009985
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author Matsuda, Takeru
Homae, Fumitaka
Watanabe, Hama
Taga, Gentaro
Komaki, Fumiyasu
author_facet Matsuda, Takeru
Homae, Fumitaka
Watanabe, Hama
Taga, Gentaro
Komaki, Fumiyasu
author_sort Matsuda, Takeru
collection PubMed
description The functional near-infrared spectroscopy (fNIRS) can detect hemodynamic responses in the brain and the data consist of bivariate time series of oxygenated hemoglobin (oxy-Hb) and deoxygenated hemoglobin (deoxy-Hb) on each channel. In this study, we investigate oscillatory changes in infant fNIRS signals by using the oscillator decompisition method (OSC-DECOMP), which is a statistical method for extracting oscillators from time series data based on Gaussian linear state space models. OSC-DECOMP provides a natural decomposition of fNIRS data into oscillation components in a data-driven manner and does not require the arbitrary selection of band-pass filters. We analyzed 18-ch fNIRS data (3 minutes) acquired from 21 sleeping 3-month-old infants. Five to seven oscillators were extracted on most channels, and their frequency distribution had three peaks in the vicinity of 0.01-0.1 Hz, 1.6-2.4 Hz and 3.6-4.4 Hz. The first peak was considered to reflect hemodynamic changes in response to the brain activity, and the phase difference between oxy-Hb and deoxy-Hb for the associated oscillators was at approximately 230 degrees. The second peak was attributed to cardiac pulse waves and mirroring noise. Although these oscillators have close frequencies, OSC-DECOMP can separate them through estimating their different projection patterns on oxy-Hb and deoxy-Hb. The third peak was regarded as the harmonic of the second peak. By comparing the Akaike Information Criterion (AIC) of two state space models, we determined that the time series of oxy-Hb and deoxy-Hb on each channel originate from common oscillatory activity. We also utilized the result of OSC-DECOMP to investigate the frequency-specific functional connectivity. Whereas the brain oscillator exhibited functional connectivity, the pulse waves and mirroring noise oscillators showed spatially homogeneous and independent changes. OSC-DECOMP is a promising tool for data-driven extraction of oscillation components from biological time series data.
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spelling pubmed-89828752022-04-06 Oscillator decomposition of infant fNIRS data Matsuda, Takeru Homae, Fumitaka Watanabe, Hama Taga, Gentaro Komaki, Fumiyasu PLoS Comput Biol Research Article The functional near-infrared spectroscopy (fNIRS) can detect hemodynamic responses in the brain and the data consist of bivariate time series of oxygenated hemoglobin (oxy-Hb) and deoxygenated hemoglobin (deoxy-Hb) on each channel. In this study, we investigate oscillatory changes in infant fNIRS signals by using the oscillator decompisition method (OSC-DECOMP), which is a statistical method for extracting oscillators from time series data based on Gaussian linear state space models. OSC-DECOMP provides a natural decomposition of fNIRS data into oscillation components in a data-driven manner and does not require the arbitrary selection of band-pass filters. We analyzed 18-ch fNIRS data (3 minutes) acquired from 21 sleeping 3-month-old infants. Five to seven oscillators were extracted on most channels, and their frequency distribution had three peaks in the vicinity of 0.01-0.1 Hz, 1.6-2.4 Hz and 3.6-4.4 Hz. The first peak was considered to reflect hemodynamic changes in response to the brain activity, and the phase difference between oxy-Hb and deoxy-Hb for the associated oscillators was at approximately 230 degrees. The second peak was attributed to cardiac pulse waves and mirroring noise. Although these oscillators have close frequencies, OSC-DECOMP can separate them through estimating their different projection patterns on oxy-Hb and deoxy-Hb. The third peak was regarded as the harmonic of the second peak. By comparing the Akaike Information Criterion (AIC) of two state space models, we determined that the time series of oxy-Hb and deoxy-Hb on each channel originate from common oscillatory activity. We also utilized the result of OSC-DECOMP to investigate the frequency-specific functional connectivity. Whereas the brain oscillator exhibited functional connectivity, the pulse waves and mirroring noise oscillators showed spatially homogeneous and independent changes. OSC-DECOMP is a promising tool for data-driven extraction of oscillation components from biological time series data. Public Library of Science 2022-03-24 /pmc/articles/PMC8982875/ /pubmed/35324896 http://dx.doi.org/10.1371/journal.pcbi.1009985 Text en © 2022 Matsuda et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Matsuda, Takeru
Homae, Fumitaka
Watanabe, Hama
Taga, Gentaro
Komaki, Fumiyasu
Oscillator decomposition of infant fNIRS data
title Oscillator decomposition of infant fNIRS data
title_full Oscillator decomposition of infant fNIRS data
title_fullStr Oscillator decomposition of infant fNIRS data
title_full_unstemmed Oscillator decomposition of infant fNIRS data
title_short Oscillator decomposition of infant fNIRS data
title_sort oscillator decomposition of infant fnirs data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8982875/
https://www.ncbi.nlm.nih.gov/pubmed/35324896
http://dx.doi.org/10.1371/journal.pcbi.1009985
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