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Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate)
The title Schiff base compound, C(20)H(20)N(2)O(4), synthesized by the condensation reaction of methyl 3-amino-4-methylbenzoat and glyoxal in ethanol, crystallizes in the the monoclinic space group P2(1)/n. The molecule is Z-shaped with the C—N—C—C torsion angle being 47.58 (18)°. In the crystal,...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8983970/ https://www.ncbi.nlm.nih.gov/pubmed/35492265 http://dx.doi.org/10.1107/S2056989022002092 |
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author | Yeşilbağ, Semanur Çınar, Emine Berrin Dege, Necmi Ağar, Erbil Saif, Eiad |
author_facet | Yeşilbağ, Semanur Çınar, Emine Berrin Dege, Necmi Ağar, Erbil Saif, Eiad |
author_sort | Yeşilbağ, Semanur |
collection | PubMed |
description | The title Schiff base compound, C(20)H(20)N(2)O(4), synthesized by the condensation reaction of methyl 3-amino-4-methylbenzoat and glyoxal in ethanol, crystallizes in the the monoclinic space group P2(1)/n. The molecule is Z-shaped with the C—N—C—C torsion angle being 47.58 (18)°. In the crystal, pairs of molecules are linked via C—H⋯N hydrogen bonds, forming centrosymetric dimers with an R (2) (2)(8) ring motif; this connectivity leads to the formation of columns running along the a-axis direction. Hirshfeld surface analysis and two-dimensional fingerprint plots were used to explore the intermolecular interactions and revealed that the most significant contributions to the crystal packing are from H⋯H (49.4%), H⋯O/O⋯H (19.0%) and H⋯C/C⋯H (17.5%) contacts. Energy frameworks were constructed through different intermolecular interaction energies to investigate the stability of the compound. The net interaction energies for the title compound were found to be electrostatic (E (ele) = −48.4 kJ mol(−1)), polarization (E (pol) = −9.7 kJ mol(−1)), dispersion (E (dis) = −186.9 kJ mol(−1)) and repulsion (E (rep) = 94.9 kJ mol(−1)) with a total interaction energy, E (tot), of −162.4 kJ mol(−1). |
format | Online Article Text |
id | pubmed-8983970 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-89839702022-04-28 Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) Yeşilbağ, Semanur Çınar, Emine Berrin Dege, Necmi Ağar, Erbil Saif, Eiad Acta Crystallogr E Crystallogr Commun Research Communications The title Schiff base compound, C(20)H(20)N(2)O(4), synthesized by the condensation reaction of methyl 3-amino-4-methylbenzoat and glyoxal in ethanol, crystallizes in the the monoclinic space group P2(1)/n. The molecule is Z-shaped with the C—N—C—C torsion angle being 47.58 (18)°. In the crystal, pairs of molecules are linked via C—H⋯N hydrogen bonds, forming centrosymetric dimers with an R (2) (2)(8) ring motif; this connectivity leads to the formation of columns running along the a-axis direction. Hirshfeld surface analysis and two-dimensional fingerprint plots were used to explore the intermolecular interactions and revealed that the most significant contributions to the crystal packing are from H⋯H (49.4%), H⋯O/O⋯H (19.0%) and H⋯C/C⋯H (17.5%) contacts. Energy frameworks were constructed through different intermolecular interaction energies to investigate the stability of the compound. The net interaction energies for the title compound were found to be electrostatic (E (ele) = −48.4 kJ mol(−1)), polarization (E (pol) = −9.7 kJ mol(−1)), dispersion (E (dis) = −186.9 kJ mol(−1)) and repulsion (E (rep) = 94.9 kJ mol(−1)) with a total interaction energy, E (tot), of −162.4 kJ mol(−1). International Union of Crystallography 2022-03-01 /pmc/articles/PMC8983970/ /pubmed/35492265 http://dx.doi.org/10.1107/S2056989022002092 Text en © Yeşilbağ et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Yeşilbağ, Semanur Çınar, Emine Berrin Dege, Necmi Ağar, Erbil Saif, Eiad Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) |
title | Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) |
title_full | Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) |
title_fullStr | Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) |
title_full_unstemmed | Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) |
title_short | Crystal structure and Hirshfeld surface analysis of dimethyl 3,3′-{[(1E,2E)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) |
title_sort | crystal structure and hirshfeld surface analysis of dimethyl 3,3′-{[(1e,2e)-ethane-1,2-diylidene]bis(azanylylidene)}bis(4-methylbenzoate) |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8983970/ https://www.ncbi.nlm.nih.gov/pubmed/35492265 http://dx.doi.org/10.1107/S2056989022002092 |
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