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Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress

TIFY proteins play crucial roles in plant abiotic and biotic stress responses. Our transcriptome data revealed several TIFY family genes with significantly upregulated expression under drought, salt, and ABA treatments. However, the functions of the GmTIFY family genes are still unknown in abiotic s...

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Autores principales: Liu, Ya-Li, Zheng, Lei, Jin, Long-Guo, Liu, Yuan-Xia, Kong, Ya-Nan, Wang, Yi-Xuan, Yu, Tai-Fei, Chen, Jun, Zhou, Yong-Bin, Chen, Ming, Wang, Feng-Zhi, Ma, You-Zhi, Xu, Zhao-Shi, Lan, Jin-Hao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8984480/
https://www.ncbi.nlm.nih.gov/pubmed/35401633
http://dx.doi.org/10.3389/fpls.2022.845314
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author Liu, Ya-Li
Zheng, Lei
Jin, Long-Guo
Liu, Yuan-Xia
Kong, Ya-Nan
Wang, Yi-Xuan
Yu, Tai-Fei
Chen, Jun
Zhou, Yong-Bin
Chen, Ming
Wang, Feng-Zhi
Ma, You-Zhi
Xu, Zhao-Shi
Lan, Jin-Hao
author_facet Liu, Ya-Li
Zheng, Lei
Jin, Long-Guo
Liu, Yuan-Xia
Kong, Ya-Nan
Wang, Yi-Xuan
Yu, Tai-Fei
Chen, Jun
Zhou, Yong-Bin
Chen, Ming
Wang, Feng-Zhi
Ma, You-Zhi
Xu, Zhao-Shi
Lan, Jin-Hao
author_sort Liu, Ya-Li
collection PubMed
description TIFY proteins play crucial roles in plant abiotic and biotic stress responses. Our transcriptome data revealed several TIFY family genes with significantly upregulated expression under drought, salt, and ABA treatments. However, the functions of the GmTIFY family genes are still unknown in abiotic stresses. We identified 38 GmTIFY genes and found that TIFY10 homologous genes have the most duplication events, higher selection pressure, and more obvious response to abiotic stresses compared with other homologous genes. Expression pattern analysis showed that GmTIFY10e and GmTIFY10g genes were significantly induced by salt stress. Under salt stress, GmTIFY10e and GmTIFY10g transgenic Arabidopsis plants showed higher root lengths and fresh weights and had significantly better growth than the wild type (WT). In addition, overexpression of GmTIFY10e and GmTIFY10g genes in soybean improved salt tolerance by increasing the PRO, POD, and CAT contents and decreasing the MDA content; on the contrary, RNA interference plants showed sensitivity to salt stress. Overexpression of GmTIFY10e and GmTIFY10g in Arabidopsis and soybean could improve the salt tolerance of plants, while the RNAi of GmTIFY10e and GmTIFY10g significantly increased sensitivity to salt stress in soybean. Further analysis demonstrated that GmTIFY10e and GmTIFY10g genes changed the expression levels of genes related to the ABA signal pathway, including GmSnRK2, GmPP2C, GmMYC2, GmCAT1, and GmPOD. This study provides a basis for comprehensive analysis of the role of soybean TIFY genes in stress response in the future.
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spelling pubmed-89844802022-04-07 Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress Liu, Ya-Li Zheng, Lei Jin, Long-Guo Liu, Yuan-Xia Kong, Ya-Nan Wang, Yi-Xuan Yu, Tai-Fei Chen, Jun Zhou, Yong-Bin Chen, Ming Wang, Feng-Zhi Ma, You-Zhi Xu, Zhao-Shi Lan, Jin-Hao Front Plant Sci Plant Science TIFY proteins play crucial roles in plant abiotic and biotic stress responses. Our transcriptome data revealed several TIFY family genes with significantly upregulated expression under drought, salt, and ABA treatments. However, the functions of the GmTIFY family genes are still unknown in abiotic stresses. We identified 38 GmTIFY genes and found that TIFY10 homologous genes have the most duplication events, higher selection pressure, and more obvious response to abiotic stresses compared with other homologous genes. Expression pattern analysis showed that GmTIFY10e and GmTIFY10g genes were significantly induced by salt stress. Under salt stress, GmTIFY10e and GmTIFY10g transgenic Arabidopsis plants showed higher root lengths and fresh weights and had significantly better growth than the wild type (WT). In addition, overexpression of GmTIFY10e and GmTIFY10g genes in soybean improved salt tolerance by increasing the PRO, POD, and CAT contents and decreasing the MDA content; on the contrary, RNA interference plants showed sensitivity to salt stress. Overexpression of GmTIFY10e and GmTIFY10g in Arabidopsis and soybean could improve the salt tolerance of plants, while the RNAi of GmTIFY10e and GmTIFY10g significantly increased sensitivity to salt stress in soybean. Further analysis demonstrated that GmTIFY10e and GmTIFY10g genes changed the expression levels of genes related to the ABA signal pathway, including GmSnRK2, GmPP2C, GmMYC2, GmCAT1, and GmPOD. This study provides a basis for comprehensive analysis of the role of soybean TIFY genes in stress response in the future. Frontiers Media S.A. 2022-03-23 /pmc/articles/PMC8984480/ /pubmed/35401633 http://dx.doi.org/10.3389/fpls.2022.845314 Text en Copyright © 2022 Liu, Zheng, Jin, Liu, Kong, Wang, Yu, Chen, Zhou, Chen, Wang, Ma, Xu and Lan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Liu, Ya-Li
Zheng, Lei
Jin, Long-Guo
Liu, Yuan-Xia
Kong, Ya-Nan
Wang, Yi-Xuan
Yu, Tai-Fei
Chen, Jun
Zhou, Yong-Bin
Chen, Ming
Wang, Feng-Zhi
Ma, You-Zhi
Xu, Zhao-Shi
Lan, Jin-Hao
Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress
title Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress
title_full Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress
title_fullStr Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress
title_full_unstemmed Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress
title_short Genome-Wide Analysis of the Soybean TIFY Family and Identification of GmTIFY10e and GmTIFY10g Response to Salt Stress
title_sort genome-wide analysis of the soybean tify family and identification of gmtify10e and gmtify10g response to salt stress
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8984480/
https://www.ncbi.nlm.nih.gov/pubmed/35401633
http://dx.doi.org/10.3389/fpls.2022.845314
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