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CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development

BACKGROUND: The growth and development of muscle stem cells (MuSCs) are significant events known to affect muscle plasticity, disease, meat production, and meat quality, which involves the types and functions of mRNA and non-coding RNA. Here, MuSCs were cultured from Guangxi fetal cattle. RNA sequen...

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Autores principales: Zhang, Rui-Men, Pan, Yu, Zou, Chao-Xia, An, Qiang, Cheng, Juan-Ru, Li, Peng-Ju, Zheng, Zi-Hua, Pan, Yan, Feng, Wan-You, Yang, Su-Fang, Shi, De-Shun, Wei, Ying-Ming, Deng, Yan-Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8985345/
https://www.ncbi.nlm.nih.gov/pubmed/35387588
http://dx.doi.org/10.1186/s12864-022-08518-4
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author Zhang, Rui-Men
Pan, Yu
Zou, Chao-Xia
An, Qiang
Cheng, Juan-Ru
Li, Peng-Ju
Zheng, Zi-Hua
Pan, Yan
Feng, Wan-You
Yang, Su-Fang
Shi, De-Shun
Wei, Ying-Ming
Deng, Yan-Fei
author_facet Zhang, Rui-Men
Pan, Yu
Zou, Chao-Xia
An, Qiang
Cheng, Juan-Ru
Li, Peng-Ju
Zheng, Zi-Hua
Pan, Yan
Feng, Wan-You
Yang, Su-Fang
Shi, De-Shun
Wei, Ying-Ming
Deng, Yan-Fei
author_sort Zhang, Rui-Men
collection PubMed
description BACKGROUND: The growth and development of muscle stem cells (MuSCs) are significant events known to affect muscle plasticity, disease, meat production, and meat quality, which involves the types and functions of mRNA and non-coding RNA. Here, MuSCs were cultured from Guangxi fetal cattle. RNA sequencing was used to analyze the RNA expression of mRNA and non-coding RNAs during the cell proliferation and differentiation phases. RESULTS: Two thousand one hundred forty-eight mRNAs and 888 non-coding RNAs were differentially expressed between cell proliferation and differentiation phases, including 113 miRNAs, 662 lncRNAs, and 113 circRNAs. RT-qPCR verified the differential expression levels of mRNAs and non-coding RNAs, and the differentially expressed circUBE2Q2 was subsequently characterized. Expression profile analysis revealed that circUBE2Q2 was abundant in muscle tissues and intramuscular fat. The expression of cricUBE2Q2 was also significantly upregulated during MuSCs myogenic differentiation and SVFs adipogenic differentiation and decreased with age in cattle muscle tissue. Finally, the molecular mechanism of circUBE2Q2 regulating MuSCs function that affects skeletal muscle development was investigated. The results showed that circUBE2Q2 could serve as a sponge for miR-133a, significantly promoting differentiation and apoptosis of cultured MuSCs, and inhibiting proliferation of MuSCs. CONCLUSIONS: CircUBE2Q2 is associated with muscle growth and development and induces MuSCs myogenic differentiation through sponging miR-133a. This study will provide new clues for the mechanisms by which mRNAs and non-coding RNAs regulate skeletal muscle growth and development, affecting muscle quality and diseases. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08518-4.
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spelling pubmed-89853452022-04-07 CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development Zhang, Rui-Men Pan, Yu Zou, Chao-Xia An, Qiang Cheng, Juan-Ru Li, Peng-Ju Zheng, Zi-Hua Pan, Yan Feng, Wan-You Yang, Su-Fang Shi, De-Shun Wei, Ying-Ming Deng, Yan-Fei BMC Genomics Research BACKGROUND: The growth and development of muscle stem cells (MuSCs) are significant events known to affect muscle plasticity, disease, meat production, and meat quality, which involves the types and functions of mRNA and non-coding RNA. Here, MuSCs were cultured from Guangxi fetal cattle. RNA sequencing was used to analyze the RNA expression of mRNA and non-coding RNAs during the cell proliferation and differentiation phases. RESULTS: Two thousand one hundred forty-eight mRNAs and 888 non-coding RNAs were differentially expressed between cell proliferation and differentiation phases, including 113 miRNAs, 662 lncRNAs, and 113 circRNAs. RT-qPCR verified the differential expression levels of mRNAs and non-coding RNAs, and the differentially expressed circUBE2Q2 was subsequently characterized. Expression profile analysis revealed that circUBE2Q2 was abundant in muscle tissues and intramuscular fat. The expression of cricUBE2Q2 was also significantly upregulated during MuSCs myogenic differentiation and SVFs adipogenic differentiation and decreased with age in cattle muscle tissue. Finally, the molecular mechanism of circUBE2Q2 regulating MuSCs function that affects skeletal muscle development was investigated. The results showed that circUBE2Q2 could serve as a sponge for miR-133a, significantly promoting differentiation and apoptosis of cultured MuSCs, and inhibiting proliferation of MuSCs. CONCLUSIONS: CircUBE2Q2 is associated with muscle growth and development and induces MuSCs myogenic differentiation through sponging miR-133a. This study will provide new clues for the mechanisms by which mRNAs and non-coding RNAs regulate skeletal muscle growth and development, affecting muscle quality and diseases. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08518-4. BioMed Central 2022-04-06 /pmc/articles/PMC8985345/ /pubmed/35387588 http://dx.doi.org/10.1186/s12864-022-08518-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Zhang, Rui-Men
Pan, Yu
Zou, Chao-Xia
An, Qiang
Cheng, Juan-Ru
Li, Peng-Ju
Zheng, Zi-Hua
Pan, Yan
Feng, Wan-You
Yang, Su-Fang
Shi, De-Shun
Wei, Ying-Ming
Deng, Yan-Fei
CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development
title CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development
title_full CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development
title_fullStr CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development
title_full_unstemmed CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development
title_short CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development
title_sort circube2q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8985345/
https://www.ncbi.nlm.nih.gov/pubmed/35387588
http://dx.doi.org/10.1186/s12864-022-08518-4
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