Cargando…
Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer
The formation of gastric cancer (GC) is a complicated process involving multiple factors and multiple steps. The tumor–immune microenvironment is essential for the growth of GC and affects the prognosis of patients. We performed multiple machine learning algorithms to identify immunophenotypes and i...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8986874/ https://www.ncbi.nlm.nih.gov/pubmed/35388021 http://dx.doi.org/10.1038/s41598-022-08622-1 |
_version_ | 1784682626644180992 |
---|---|
author | Wen, Fang Lu, Xiaona Huang, Wenjie Chen, Xiaoxue Ruan, Shuai Gu, SuPing Gu, Peixing Li, Ye Liu, Jiatong Liu, Shenlin Shu, Peng |
author_facet | Wen, Fang Lu, Xiaona Huang, Wenjie Chen, Xiaoxue Ruan, Shuai Gu, SuPing Gu, Peixing Li, Ye Liu, Jiatong Liu, Shenlin Shu, Peng |
author_sort | Wen, Fang |
collection | PubMed |
description | The formation of gastric cancer (GC) is a complicated process involving multiple factors and multiple steps. The tumor–immune microenvironment is essential for the growth of GC and affects the prognosis of patients. We performed multiple machine learning algorithms to identify immunophenotypes and immunological characteristics in GC patients’ information from the TCGA database and extracted immune genes relevance of the GC immune microenvironment. C-X-C motif chemokine receptor 4 (CXCR4), belongs to the C-X-C chemokine receptor family, which can promote the invasion and migration of tumor cells. CXCR4 expression is significantly correlated to metastasis and the worse prognosis. In this work, we assessed the condition of immune cells and identified the connection between CXCR4 and GC immune microenvironment, as well as the signaling pathways that mediate the immune responses involved in CXCR4. The work showed the risk scores generated by CXCR4-related immunomodulators could distinguish risk groups consisting of differential expression genes and could use for the personalized prognosis prediction. The findings suggested that CXCR4 is involved in tumor immunity of GC, and CXCR4 is considered as a potential prognostic biomarker and immunotherapy target of GC. The prognostic immune markers from CXCR4-associated immunomodulators can independently predict the overall survival of GC. |
format | Online Article Text |
id | pubmed-8986874 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89868742022-04-08 Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer Wen, Fang Lu, Xiaona Huang, Wenjie Chen, Xiaoxue Ruan, Shuai Gu, SuPing Gu, Peixing Li, Ye Liu, Jiatong Liu, Shenlin Shu, Peng Sci Rep Article The formation of gastric cancer (GC) is a complicated process involving multiple factors and multiple steps. The tumor–immune microenvironment is essential for the growth of GC and affects the prognosis of patients. We performed multiple machine learning algorithms to identify immunophenotypes and immunological characteristics in GC patients’ information from the TCGA database and extracted immune genes relevance of the GC immune microenvironment. C-X-C motif chemokine receptor 4 (CXCR4), belongs to the C-X-C chemokine receptor family, which can promote the invasion and migration of tumor cells. CXCR4 expression is significantly correlated to metastasis and the worse prognosis. In this work, we assessed the condition of immune cells and identified the connection between CXCR4 and GC immune microenvironment, as well as the signaling pathways that mediate the immune responses involved in CXCR4. The work showed the risk scores generated by CXCR4-related immunomodulators could distinguish risk groups consisting of differential expression genes and could use for the personalized prognosis prediction. The findings suggested that CXCR4 is involved in tumor immunity of GC, and CXCR4 is considered as a potential prognostic biomarker and immunotherapy target of GC. The prognostic immune markers from CXCR4-associated immunomodulators can independently predict the overall survival of GC. Nature Publishing Group UK 2022-04-06 /pmc/articles/PMC8986874/ /pubmed/35388021 http://dx.doi.org/10.1038/s41598-022-08622-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Wen, Fang Lu, Xiaona Huang, Wenjie Chen, Xiaoxue Ruan, Shuai Gu, SuPing Gu, Peixing Li, Ye Liu, Jiatong Liu, Shenlin Shu, Peng Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer |
title | Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer |
title_full | Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer |
title_fullStr | Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer |
title_full_unstemmed | Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer |
title_short | Characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of CXCR4 in gastric cancer |
title_sort | characteristics of immunophenotypes and immunological in tumor microenvironment and analysis of immune implication of cxcr4 in gastric cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8986874/ https://www.ncbi.nlm.nih.gov/pubmed/35388021 http://dx.doi.org/10.1038/s41598-022-08622-1 |
work_keys_str_mv | AT wenfang characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT luxiaona characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT huangwenjie characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT chenxiaoxue characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT ruanshuai characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT gusuping characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT gupeixing characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT liye characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT liujiatong characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT liushenlin characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer AT shupeng characteristicsofimmunophenotypesandimmunologicalintumormicroenvironmentandanalysisofimmuneimplicationofcxcr4ingastriccancer |