Cargando…
Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis
The Ancistrus genus has extensive chromosomal diversity among species, including heteromorphic sex chromosomes occurrence. However, studies have been shown that chromosomal diversity may still be underestimated. Repetitive sequences represent a large part of eukaryotic genomes, associated with mecha...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8987504/ https://www.ncbi.nlm.nih.gov/pubmed/35401670 http://dx.doi.org/10.3389/fgene.2022.838462 |
_version_ | 1784682756903534592 |
---|---|
author | Santos da Silva, Kevin Glugoski, Larissa Vicari, Marcelo Ricardo de Souza, Augusto César Paes Noronha, Renata Coelho Rodrigues Pieczarka, Julio Cesar Nagamachi, Cleusa Yoshiko |
author_facet | Santos da Silva, Kevin Glugoski, Larissa Vicari, Marcelo Ricardo de Souza, Augusto César Paes Noronha, Renata Coelho Rodrigues Pieczarka, Julio Cesar Nagamachi, Cleusa Yoshiko |
author_sort | Santos da Silva, Kevin |
collection | PubMed |
description | The Ancistrus genus has extensive chromosomal diversity among species, including heteromorphic sex chromosomes occurrence. However, studies have been shown that chromosomal diversity may still be underestimated. Repetitive sequences represent a large part of eukaryotic genomes, associated with mechanisms of karyotypic diversification, including sex chromosomes evolution. This study analyzed the karyotype diversification of two Ancistrus species (Ancistrus sp. 1 and Ancistrus sp. 2) from the Amazon region by classical and molecular chromosomal markers. Conventional chromosome bands and fluorescence in situ hybridization using probes 18S and 5S rDNA, besides (CA)n, (CG)n, (GA)n, (CAC)n, (CAG)n, (CAT)n, (GAA)n, (GAC)n, (TAA)n, and (TTAGGG)n in tandem repeats were determined on the karyotypes. Ancistrus sp. 1 and Ancistrus sp. 2 presented karyotypes with 2n = 38 (20 m + 14sm+4st, XX/XY) and 2n = 34 (20 m + 14sm, without heteromorphic sex chromosomes), respectively. Robertsonian rearrangements can explain the diploid number difference. C-bands occurred in pericentromeric regions in some chromosomes, and a single 18S rDNA locus occurred in both species. The 5S rDNA showed variation in the number of loci between species karyotypes, suggesting the occurrence of unstable sites and rearrangements associated with these sequences in Ancistrus. The microsatellite mapping evidenced distinct patterns of organization between the two analyzed species, occurring mainly in the sex chromosomes in Ancistrus sp. 1, and in the centromeric and pericentromeric regions of chromosomes m/sm in Ancistrus sp. 2. These data shows the extensive chromosomal diversity of repetitive sequences in Ancistrus, which were involved in Robertsonian rearrangements and sex chromosomes differentiation. |
format | Online Article Text |
id | pubmed-8987504 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89875042022-04-08 Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis Santos da Silva, Kevin Glugoski, Larissa Vicari, Marcelo Ricardo de Souza, Augusto César Paes Noronha, Renata Coelho Rodrigues Pieczarka, Julio Cesar Nagamachi, Cleusa Yoshiko Front Genet Genetics The Ancistrus genus has extensive chromosomal diversity among species, including heteromorphic sex chromosomes occurrence. However, studies have been shown that chromosomal diversity may still be underestimated. Repetitive sequences represent a large part of eukaryotic genomes, associated with mechanisms of karyotypic diversification, including sex chromosomes evolution. This study analyzed the karyotype diversification of two Ancistrus species (Ancistrus sp. 1 and Ancistrus sp. 2) from the Amazon region by classical and molecular chromosomal markers. Conventional chromosome bands and fluorescence in situ hybridization using probes 18S and 5S rDNA, besides (CA)n, (CG)n, (GA)n, (CAC)n, (CAG)n, (CAT)n, (GAA)n, (GAC)n, (TAA)n, and (TTAGGG)n in tandem repeats were determined on the karyotypes. Ancistrus sp. 1 and Ancistrus sp. 2 presented karyotypes with 2n = 38 (20 m + 14sm+4st, XX/XY) and 2n = 34 (20 m + 14sm, without heteromorphic sex chromosomes), respectively. Robertsonian rearrangements can explain the diploid number difference. C-bands occurred in pericentromeric regions in some chromosomes, and a single 18S rDNA locus occurred in both species. The 5S rDNA showed variation in the number of loci between species karyotypes, suggesting the occurrence of unstable sites and rearrangements associated with these sequences in Ancistrus. The microsatellite mapping evidenced distinct patterns of organization between the two analyzed species, occurring mainly in the sex chromosomes in Ancistrus sp. 1, and in the centromeric and pericentromeric regions of chromosomes m/sm in Ancistrus sp. 2. These data shows the extensive chromosomal diversity of repetitive sequences in Ancistrus, which were involved in Robertsonian rearrangements and sex chromosomes differentiation. Frontiers Media S.A. 2022-03-24 /pmc/articles/PMC8987504/ /pubmed/35401670 http://dx.doi.org/10.3389/fgene.2022.838462 Text en Copyright © 2022 Santos da Silva, Glugoski, Vicari, de Souza, Noronha, Pieczarka and Nagamachi. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Santos da Silva, Kevin Glugoski, Larissa Vicari, Marcelo Ricardo de Souza, Augusto César Paes Noronha, Renata Coelho Rodrigues Pieczarka, Julio Cesar Nagamachi, Cleusa Yoshiko Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis |
title | Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis |
title_full | Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis |
title_fullStr | Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis |
title_full_unstemmed | Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis |
title_short | Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis |
title_sort | chromosomal diversification in ancistrus species (siluriformes: loricariidae) inferred from repetitive sequence analysis |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8987504/ https://www.ncbi.nlm.nih.gov/pubmed/35401670 http://dx.doi.org/10.3389/fgene.2022.838462 |
work_keys_str_mv | AT santosdasilvakevin chromosomaldiversificationinancistrusspeciessiluriformesloricariidaeinferredfromrepetitivesequenceanalysis AT glugoskilarissa chromosomaldiversificationinancistrusspeciessiluriformesloricariidaeinferredfromrepetitivesequenceanalysis AT vicarimarceloricardo chromosomaldiversificationinancistrusspeciessiluriformesloricariidaeinferredfromrepetitivesequenceanalysis AT desouzaaugustocesarpaes chromosomaldiversificationinancistrusspeciessiluriformesloricariidaeinferredfromrepetitivesequenceanalysis AT noronharenatacoelhorodrigues chromosomaldiversificationinancistrusspeciessiluriformesloricariidaeinferredfromrepetitivesequenceanalysis AT pieczarkajuliocesar chromosomaldiversificationinancistrusspeciessiluriformesloricariidaeinferredfromrepetitivesequenceanalysis AT nagamachicleusayoshiko chromosomaldiversificationinancistrusspeciessiluriformesloricariidaeinferredfromrepetitivesequenceanalysis |