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A simple and general approach to generate photoactivatable DNA processing enzymes
DNA processing enzymes, such as DNA polymerases and endonucleases, have found many applications in biotechnology, molecular diagnostics, and synthetic biology, among others. The development of enzymes with controllable activity, such as hot-start or light-activatable versions, has boosted their appl...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8989547/ https://www.ncbi.nlm.nih.gov/pubmed/34904657 http://dx.doi.org/10.1093/nar/gkab1212 |
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author | Kesici, Merve-Zeynep Tinnefeld, Philip Vera, Andrés Manuel |
author_facet | Kesici, Merve-Zeynep Tinnefeld, Philip Vera, Andrés Manuel |
author_sort | Kesici, Merve-Zeynep |
collection | PubMed |
description | DNA processing enzymes, such as DNA polymerases and endonucleases, have found many applications in biotechnology, molecular diagnostics, and synthetic biology, among others. The development of enzymes with controllable activity, such as hot-start or light-activatable versions, has boosted their applications and improved the sensitivity and specificity of the existing ones. However, current approaches to produce controllable enzymes are experimentally demanding to develop and case-specific. Here, we introduce a simple and general method to design light-start DNA processing enzymes. In order to prove its versatility, we applied our method to three DNA polymerases commonly used in biotechnology, including the Phi29 (mesophilic), Taq, and Pfu polymerases, and one restriction enzyme. Light-start enzymes showed suppressed polymerase, exonuclease, and endonuclease activity until they were re-activated by an UV pulse. Finally, we applied our enzymes to common molecular biology assays and showed comparable performance to commercial hot-start enzymes. |
format | Online Article Text |
id | pubmed-8989547 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-89895472022-04-08 A simple and general approach to generate photoactivatable DNA processing enzymes Kesici, Merve-Zeynep Tinnefeld, Philip Vera, Andrés Manuel Nucleic Acids Res Methods Online DNA processing enzymes, such as DNA polymerases and endonucleases, have found many applications in biotechnology, molecular diagnostics, and synthetic biology, among others. The development of enzymes with controllable activity, such as hot-start or light-activatable versions, has boosted their applications and improved the sensitivity and specificity of the existing ones. However, current approaches to produce controllable enzymes are experimentally demanding to develop and case-specific. Here, we introduce a simple and general method to design light-start DNA processing enzymes. In order to prove its versatility, we applied our method to three DNA polymerases commonly used in biotechnology, including the Phi29 (mesophilic), Taq, and Pfu polymerases, and one restriction enzyme. Light-start enzymes showed suppressed polymerase, exonuclease, and endonuclease activity until they were re-activated by an UV pulse. Finally, we applied our enzymes to common molecular biology assays and showed comparable performance to commercial hot-start enzymes. Oxford University Press 2021-12-14 /pmc/articles/PMC8989547/ /pubmed/34904657 http://dx.doi.org/10.1093/nar/gkab1212 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methods Online Kesici, Merve-Zeynep Tinnefeld, Philip Vera, Andrés Manuel A simple and general approach to generate photoactivatable DNA processing enzymes |
title | A simple and general approach to generate photoactivatable DNA processing enzymes |
title_full | A simple and general approach to generate photoactivatable DNA processing enzymes |
title_fullStr | A simple and general approach to generate photoactivatable DNA processing enzymes |
title_full_unstemmed | A simple and general approach to generate photoactivatable DNA processing enzymes |
title_short | A simple and general approach to generate photoactivatable DNA processing enzymes |
title_sort | simple and general approach to generate photoactivatable dna processing enzymes |
topic | Methods Online |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8989547/ https://www.ncbi.nlm.nih.gov/pubmed/34904657 http://dx.doi.org/10.1093/nar/gkab1212 |
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