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Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer
Randomized Controlled Trials (RCT) are the gold standard for estimating treatment effects but some important situations in cancer care require treatment effect estimates from observational data. We developed “Proxy based individual treatment effect modeling in cancer” (PROTECT) to estimate treatment...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8989977/ https://www.ncbi.nlm.nih.gov/pubmed/35393451 http://dx.doi.org/10.1038/s41598-022-09775-9 |
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author | van Amsterdam, Wouter A. C. Verhoeff, Joost. J. C. Harlianto, Netanja I. Bartholomeus, Gijs A. Puli, Aahlad Manas de Jong, Pim A. Leiner, Tim van Lindert, Anne S. R. Eijkemans, Marinus J. C. Ranganath, Rajesh |
author_facet | van Amsterdam, Wouter A. C. Verhoeff, Joost. J. C. Harlianto, Netanja I. Bartholomeus, Gijs A. Puli, Aahlad Manas de Jong, Pim A. Leiner, Tim van Lindert, Anne S. R. Eijkemans, Marinus J. C. Ranganath, Rajesh |
author_sort | van Amsterdam, Wouter A. C. |
collection | PubMed |
description | Randomized Controlled Trials (RCT) are the gold standard for estimating treatment effects but some important situations in cancer care require treatment effect estimates from observational data. We developed “Proxy based individual treatment effect modeling in cancer” (PROTECT) to estimate treatment effects from observational data when there are unobserved confounders, but proxy measurements of these confounders exist. We identified an unobserved confounder in observational cancer research: overall fitness. Proxy measurements of overall fitness exist like performance score, but the fitness as observed by the treating physician is unavailable for research. PROTECT reconstructs the distribution of the unobserved confounder based on these proxy measurements to estimate the treatment effect. PROTECT was applied to an observational cohort of 504 stage III non-small cell lung cancer (NSCLC) patients, treated with concurrent chemoradiation or sequential chemoradiation. Whereas conventional confounding adjustment methods seemed to overestimate the treatment effect, PROTECT provided credible treatment effect estimates. |
format | Online Article Text |
id | pubmed-8989977 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89899772022-04-11 Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer van Amsterdam, Wouter A. C. Verhoeff, Joost. J. C. Harlianto, Netanja I. Bartholomeus, Gijs A. Puli, Aahlad Manas de Jong, Pim A. Leiner, Tim van Lindert, Anne S. R. Eijkemans, Marinus J. C. Ranganath, Rajesh Sci Rep Article Randomized Controlled Trials (RCT) are the gold standard for estimating treatment effects but some important situations in cancer care require treatment effect estimates from observational data. We developed “Proxy based individual treatment effect modeling in cancer” (PROTECT) to estimate treatment effects from observational data when there are unobserved confounders, but proxy measurements of these confounders exist. We identified an unobserved confounder in observational cancer research: overall fitness. Proxy measurements of overall fitness exist like performance score, but the fitness as observed by the treating physician is unavailable for research. PROTECT reconstructs the distribution of the unobserved confounder based on these proxy measurements to estimate the treatment effect. PROTECT was applied to an observational cohort of 504 stage III non-small cell lung cancer (NSCLC) patients, treated with concurrent chemoradiation or sequential chemoradiation. Whereas conventional confounding adjustment methods seemed to overestimate the treatment effect, PROTECT provided credible treatment effect estimates. Nature Publishing Group UK 2022-04-07 /pmc/articles/PMC8989977/ /pubmed/35393451 http://dx.doi.org/10.1038/s41598-022-09775-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article van Amsterdam, Wouter A. C. Verhoeff, Joost. J. C. Harlianto, Netanja I. Bartholomeus, Gijs A. Puli, Aahlad Manas de Jong, Pim A. Leiner, Tim van Lindert, Anne S. R. Eijkemans, Marinus J. C. Ranganath, Rajesh Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer |
title | Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer |
title_full | Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer |
title_fullStr | Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer |
title_full_unstemmed | Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer |
title_short | Individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage III non-small cell lung cancer |
title_sort | individual treatment effect estimation in the presence of unobserved confounding using proxies: a cohort study in stage iii non-small cell lung cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8989977/ https://www.ncbi.nlm.nih.gov/pubmed/35393451 http://dx.doi.org/10.1038/s41598-022-09775-9 |
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