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Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters
The Coronavirus disease 2019 (COVID-19) pandemic has severely crippled the economy on a global scale. Effective and accurate forecasting models are essential for proper management and preparedness of the healthcare system and resources, eventually aiding in preventing the rapid spread of the disease...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Association for Gondwana Research. Published by Elsevier B.V.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8990533/ https://www.ncbi.nlm.nih.gov/pubmed/35431596 http://dx.doi.org/10.1016/j.gr.2022.03.014 |
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author | Wathore, Roshan Rawlekar, Samyak Anjum, Saima Gupta, Ankit Bherwani, Hemant Labhasetwar, Nitin Kumar, Rakesh |
author_facet | Wathore, Roshan Rawlekar, Samyak Anjum, Saima Gupta, Ankit Bherwani, Hemant Labhasetwar, Nitin Kumar, Rakesh |
author_sort | Wathore, Roshan |
collection | PubMed |
description | The Coronavirus disease 2019 (COVID-19) pandemic has severely crippled the economy on a global scale. Effective and accurate forecasting models are essential for proper management and preparedness of the healthcare system and resources, eventually aiding in preventing the rapid spread of the disease. With the intention to provide better forecasting tools for the management of the pandemic, the current research work analyzes the effect of the inclusion of environmental parameters in the forecasting of daily COVID-19 cases. Three univariate variants of the long short-term memory (LSTM) model (basic/vanilla, stacked, and bi-directional) were employed for the prediction of daily cases in 9 cities across 3 countries with varying climatic zones (tropical, sub-tropical, and frigid), namely India (New Delhi and Nagpur), USA (Yuma and Los Angeles) and Sweden (Stockholm, Skane, Uppsala and Vastra Gotaland). The results were compared to a basic multivariate LSTM model with environmental parameters (temperature (T) and relative humidity (RH)) as additional inputs. Periods with no or minimal lockdown were chosen specifically in these cities to observe the uninhibited spread of COVID-19 and explore its dependence on daily environmental parameters. The multivariate LSTM model showed the best overall performance; the mean absolute percentage error (MAPE) showed an average of 64% improvement from other univariate models upon the inclusion of the above environmental parameters. Correlation with temperature was generally positive for the cold regions and negative for the warm regions. RH showed mixed correlations, most likely driven by its temperature dependence and effect of allied local factors. The results suggest that the inclusion of environmental parameters could significantly improve the performance of LSTMs for predicting daily cases of COVID-19, although other positive and negative confounding factors can affect the forecasting power. |
format | Online Article Text |
id | pubmed-8990533 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | International Association for Gondwana Research. Published by Elsevier B.V. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89905332022-04-11 Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters Wathore, Roshan Rawlekar, Samyak Anjum, Saima Gupta, Ankit Bherwani, Hemant Labhasetwar, Nitin Kumar, Rakesh Gondwana Res Article The Coronavirus disease 2019 (COVID-19) pandemic has severely crippled the economy on a global scale. Effective and accurate forecasting models are essential for proper management and preparedness of the healthcare system and resources, eventually aiding in preventing the rapid spread of the disease. With the intention to provide better forecasting tools for the management of the pandemic, the current research work analyzes the effect of the inclusion of environmental parameters in the forecasting of daily COVID-19 cases. Three univariate variants of the long short-term memory (LSTM) model (basic/vanilla, stacked, and bi-directional) were employed for the prediction of daily cases in 9 cities across 3 countries with varying climatic zones (tropical, sub-tropical, and frigid), namely India (New Delhi and Nagpur), USA (Yuma and Los Angeles) and Sweden (Stockholm, Skane, Uppsala and Vastra Gotaland). The results were compared to a basic multivariate LSTM model with environmental parameters (temperature (T) and relative humidity (RH)) as additional inputs. Periods with no or minimal lockdown were chosen specifically in these cities to observe the uninhibited spread of COVID-19 and explore its dependence on daily environmental parameters. The multivariate LSTM model showed the best overall performance; the mean absolute percentage error (MAPE) showed an average of 64% improvement from other univariate models upon the inclusion of the above environmental parameters. Correlation with temperature was generally positive for the cold regions and negative for the warm regions. RH showed mixed correlations, most likely driven by its temperature dependence and effect of allied local factors. The results suggest that the inclusion of environmental parameters could significantly improve the performance of LSTMs for predicting daily cases of COVID-19, although other positive and negative confounding factors can affect the forecasting power. International Association for Gondwana Research. Published by Elsevier B.V. 2023-02 2022-04-08 /pmc/articles/PMC8990533/ /pubmed/35431596 http://dx.doi.org/10.1016/j.gr.2022.03.014 Text en © 2022 International Association for Gondwana Research. Published by Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Wathore, Roshan Rawlekar, Samyak Anjum, Saima Gupta, Ankit Bherwani, Hemant Labhasetwar, Nitin Kumar, Rakesh Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters |
title | Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters |
title_full | Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters |
title_fullStr | Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters |
title_full_unstemmed | Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters |
title_short | Improving performance of deep learning predictive models for COVID-19 by incorporating environmental parameters |
title_sort | improving performance of deep learning predictive models for covid-19 by incorporating environmental parameters |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8990533/ https://www.ncbi.nlm.nih.gov/pubmed/35431596 http://dx.doi.org/10.1016/j.gr.2022.03.014 |
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