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A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer

OBJECTIVE: Nowadays, cancer is still a leading public health problem all over the world. Several studies have reported the GPX8 could be correlated with the poor prognostic of Gastric Cancer and Breast Cancer. However, the prognostic potential of GPX8 in pan-cancer remains unclear. In this work, we...

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Autores principales: Ren, Zhijing, He, Yu, Yang, Qinqin, Guo, Jiajia, Huang, Haifeng, Li, Bo, Wang, Dong, Yang, Zhen, Tian, Xiaobin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8991916/
https://www.ncbi.nlm.nih.gov/pubmed/35402257
http://dx.doi.org/10.3389/fonc.2022.812811
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author Ren, Zhijing
He, Yu
Yang, Qinqin
Guo, Jiajia
Huang, Haifeng
Li, Bo
Wang, Dong
Yang, Zhen
Tian, Xiaobin
author_facet Ren, Zhijing
He, Yu
Yang, Qinqin
Guo, Jiajia
Huang, Haifeng
Li, Bo
Wang, Dong
Yang, Zhen
Tian, Xiaobin
author_sort Ren, Zhijing
collection PubMed
description OBJECTIVE: Nowadays, cancer is still a leading public health problem all over the world. Several studies have reported the GPX8 could be correlated with the poor prognostic of Gastric Cancer and Breast Cancer. However, the prognostic potential of GPX8 in pan-cancer remains unclear. In this work, we aimed to explore the prognostic and immunological role of GPX8 in human cancer and confirm the oncogenic value in GBM. METHODS: The data of TCGA, CPTAC and GEO databases were adopted for the survival analysis. Based on the RNAseq and Methylation450 data of TCGA, the R language and package “ggplot2” were used to analyze the DNA methylation at the region of the promoter of GPX8 in tumors. The genetic alteration of GPX8 from TCGA cancers was investigated in cBioPortal. The R package “GSVA” and “ssGSEA” were employed to evaluate the correlation of GPX8 expression with the immune infiltration. The KEGG website was used for pathway analysis. The STRING website and GEPIA were performed to predict GPX8-binding proteins. The R package “ggplot2” and “clusterprofile” were used to analyze and visualize the GO and KEGG analysis. A normal human astrocyte cell line and three GBM cell lines were cultured under suitable conditions. The shRNA was transferred to cells by Lipofectamine 3000. The qRT-PCR and WB were adopted to detect the expression of GPX8. The wound-healing assay and transwell assay were taken to analyze the invasive and metastatic abilities. The tumor tissues and paracancerous ones were collected from patients with GBM. WB assay was employed to analyze the expression of GPX8 protein. RESULTS: GPX8 was a valuable diagnostic biomarker in multiple cancers, including GBM/LGG (glioblastoma multiforme/Brain lower grade glioma), KIRC (kidney renal clear cell carcinoma), KIRP (kidney renal papillary cell carcinoma) and STAD (stomach adenocarcinoma). Moreover, we observed a correlation between the expression of GPX8 and the reduced DNA methylation at the promoter region in several tumors, such as GBM/LGG. Our results indicated a positive correlation between the GPX8 expression and immune infiltration. In addition, the enrichment analysis demonstrated that antioxidant activity was mainly involved in the functional mechanism of GPX8. In particular, we first confirmed the up-regulated of GPX8 in GBM cells and observed the suppression of migrative and invasive phenotypes by knockdown of GPX8. Furthermore, we confirmed the expression of GPX8 was higher in GBM tumor tissues than paracancerous ones. CONCLUSION: Our study showed a correlation of GPX8 expression with clinical prognosis, DNA methylation and immune infiltrates. Furthermore, we first confirmed GPX8 was highly expressed in GBM cells and contributed to migration and invasion. These results provided a predictive biomarker and an inclusive understanding of the GPX8 expression in multiple tumors types, especially in GBM.
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spelling pubmed-89919162022-04-09 A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer Ren, Zhijing He, Yu Yang, Qinqin Guo, Jiajia Huang, Haifeng Li, Bo Wang, Dong Yang, Zhen Tian, Xiaobin Front Oncol Oncology OBJECTIVE: Nowadays, cancer is still a leading public health problem all over the world. Several studies have reported the GPX8 could be correlated with the poor prognostic of Gastric Cancer and Breast Cancer. However, the prognostic potential of GPX8 in pan-cancer remains unclear. In this work, we aimed to explore the prognostic and immunological role of GPX8 in human cancer and confirm the oncogenic value in GBM. METHODS: The data of TCGA, CPTAC and GEO databases were adopted for the survival analysis. Based on the RNAseq and Methylation450 data of TCGA, the R language and package “ggplot2” were used to analyze the DNA methylation at the region of the promoter of GPX8 in tumors. The genetic alteration of GPX8 from TCGA cancers was investigated in cBioPortal. The R package “GSVA” and “ssGSEA” were employed to evaluate the correlation of GPX8 expression with the immune infiltration. The KEGG website was used for pathway analysis. The STRING website and GEPIA were performed to predict GPX8-binding proteins. The R package “ggplot2” and “clusterprofile” were used to analyze and visualize the GO and KEGG analysis. A normal human astrocyte cell line and three GBM cell lines were cultured under suitable conditions. The shRNA was transferred to cells by Lipofectamine 3000. The qRT-PCR and WB were adopted to detect the expression of GPX8. The wound-healing assay and transwell assay were taken to analyze the invasive and metastatic abilities. The tumor tissues and paracancerous ones were collected from patients with GBM. WB assay was employed to analyze the expression of GPX8 protein. RESULTS: GPX8 was a valuable diagnostic biomarker in multiple cancers, including GBM/LGG (glioblastoma multiforme/Brain lower grade glioma), KIRC (kidney renal clear cell carcinoma), KIRP (kidney renal papillary cell carcinoma) and STAD (stomach adenocarcinoma). Moreover, we observed a correlation between the expression of GPX8 and the reduced DNA methylation at the promoter region in several tumors, such as GBM/LGG. Our results indicated a positive correlation between the GPX8 expression and immune infiltration. In addition, the enrichment analysis demonstrated that antioxidant activity was mainly involved in the functional mechanism of GPX8. In particular, we first confirmed the up-regulated of GPX8 in GBM cells and observed the suppression of migrative and invasive phenotypes by knockdown of GPX8. Furthermore, we confirmed the expression of GPX8 was higher in GBM tumor tissues than paracancerous ones. CONCLUSION: Our study showed a correlation of GPX8 expression with clinical prognosis, DNA methylation and immune infiltrates. Furthermore, we first confirmed GPX8 was highly expressed in GBM cells and contributed to migration and invasion. These results provided a predictive biomarker and an inclusive understanding of the GPX8 expression in multiple tumors types, especially in GBM. Frontiers Media S.A. 2022-03-25 /pmc/articles/PMC8991916/ /pubmed/35402257 http://dx.doi.org/10.3389/fonc.2022.812811 Text en Copyright © 2022 Ren, He, Yang, Guo, Huang, Li, Wang, Yang and Tian https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Ren, Zhijing
He, Yu
Yang, Qinqin
Guo, Jiajia
Huang, Haifeng
Li, Bo
Wang, Dong
Yang, Zhen
Tian, Xiaobin
A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer
title A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer
title_full A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer
title_fullStr A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer
title_full_unstemmed A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer
title_short A Comprehensive Analysis of the Glutathione Peroxidase 8 (GPX8) in Human Cancer
title_sort comprehensive analysis of the glutathione peroxidase 8 (gpx8) in human cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8991916/
https://www.ncbi.nlm.nih.gov/pubmed/35402257
http://dx.doi.org/10.3389/fonc.2022.812811
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