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Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae

INTRODUCTION: Klebsiella pneumoniae, a multidrug resistant bacterium, that causes nosocomial infections including septicemia, pneumonia etc. Bacteriophages are potential antimicrobial agents for the treatment of antibiotic resistant bacteria. METHODS AND RESULTS: In this study, a novel bacteriophage...

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Autores principales: Nazir, Amina, Qi, Chunling, Shi, Na, Gao, Xue, Feng, Qiang, Qing, Hong, Li, Fei, Tong, Yigang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8994998/
https://www.ncbi.nlm.nih.gov/pubmed/35414748
http://dx.doi.org/10.2147/IDR.S347110
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author Nazir, Amina
Qi, Chunling
Shi, Na
Gao, Xue
Feng, Qiang
Qing, Hong
Li, Fei
Tong, Yigang
author_facet Nazir, Amina
Qi, Chunling
Shi, Na
Gao, Xue
Feng, Qiang
Qing, Hong
Li, Fei
Tong, Yigang
author_sort Nazir, Amina
collection PubMed
description INTRODUCTION: Klebsiella pneumoniae, a multidrug resistant bacterium, that causes nosocomial infections including septicemia, pneumonia etc. Bacteriophages are potential antimicrobial agents for the treatment of antibiotic resistant bacteria. METHODS AND RESULTS: In this study, a novel bacteriophage IME268 was isolated from hospital sewage against clinical multi-drug resistant Klebsiella pneumoniae. Transmission electron microscopy and genomic characterization of this phage exhibited it belongs to the Webervirus genus, Drexlerviridae family. Phage IME268 possessed a double-stranded DNA genome composed of 49,552bp with a GC content of 50.5%. The phage genome encodes 77 open reading frames, out of 44 are hypothetical proteins while 33 had assigned putative functions. No tRNA, virulence related or antibiotic resistance genes were found in phage genome. Comparative genomic analysis showed that phage IME268 has 95% identity with 87% query cover with other phages in NCBI database. Multiplicity of infection, one step growth curve and host range of phage were also measured. CONCLUSION: According to findings, Phage IME268 is a promising biological agent that infects Klebsiella pneumoniae and can be used in future phage therapies.
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spelling pubmed-89949982022-04-11 Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae Nazir, Amina Qi, Chunling Shi, Na Gao, Xue Feng, Qiang Qing, Hong Li, Fei Tong, Yigang Infect Drug Resist Original Research INTRODUCTION: Klebsiella pneumoniae, a multidrug resistant bacterium, that causes nosocomial infections including septicemia, pneumonia etc. Bacteriophages are potential antimicrobial agents for the treatment of antibiotic resistant bacteria. METHODS AND RESULTS: In this study, a novel bacteriophage IME268 was isolated from hospital sewage against clinical multi-drug resistant Klebsiella pneumoniae. Transmission electron microscopy and genomic characterization of this phage exhibited it belongs to the Webervirus genus, Drexlerviridae family. Phage IME268 possessed a double-stranded DNA genome composed of 49,552bp with a GC content of 50.5%. The phage genome encodes 77 open reading frames, out of 44 are hypothetical proteins while 33 had assigned putative functions. No tRNA, virulence related or antibiotic resistance genes were found in phage genome. Comparative genomic analysis showed that phage IME268 has 95% identity with 87% query cover with other phages in NCBI database. Multiplicity of infection, one step growth curve and host range of phage were also measured. CONCLUSION: According to findings, Phage IME268 is a promising biological agent that infects Klebsiella pneumoniae and can be used in future phage therapies. Dove 2022-04-05 /pmc/articles/PMC8994998/ /pubmed/35414748 http://dx.doi.org/10.2147/IDR.S347110 Text en © 2022 Nazir et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Nazir, Amina
Qi, Chunling
Shi, Na
Gao, Xue
Feng, Qiang
Qing, Hong
Li, Fei
Tong, Yigang
Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae
title Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae
title_full Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae
title_fullStr Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae
title_full_unstemmed Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae
title_short Characterization and Genomic Analysis of a Novel Drexlervirial Bacteriophage IME268 with Lytic Activity Against Klebsiella pneumoniae
title_sort characterization and genomic analysis of a novel drexlervirial bacteriophage ime268 with lytic activity against klebsiella pneumoniae
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8994998/
https://www.ncbi.nlm.nih.gov/pubmed/35414748
http://dx.doi.org/10.2147/IDR.S347110
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