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Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target

The underlying role of pyroptosis in breast cancer (BC) remains unknown. Herein, we investigated the correlations of 33 pyroptosis‐related genes (PRGs) with immune checkpoints and immune cell infiltrations in BC patients based on The Cancer Genome Atlas cohort (n = 996) and Gene Expression Omnibus c...

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Autores principales: Luo, Jiayue, Lai, Jianguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8995442/
https://www.ncbi.nlm.nih.gov/pubmed/35233921
http://dx.doi.org/10.1111/jcmm.17247
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author Luo, Jiayue
Lai, Jianguo
author_facet Luo, Jiayue
Lai, Jianguo
author_sort Luo, Jiayue
collection PubMed
description The underlying role of pyroptosis in breast cancer (BC) remains unknown. Herein, we investigated the correlations of 33 pyroptosis‐related genes (PRGs) with immune checkpoints and immune cell infiltrations in BC patients based on The Cancer Genome Atlas cohort (n = 996) and Gene Expression Omnibus cohort (n = 3,262). Enrichment analysis revealed that these PRGs mainly functioned in pyroptosis, inflammasomes and regulation of autophagy pathway. Four prognostic independent PRGs (CASP9, TIRAP, GSDMC and IL18) were identified. Then, cluster 1/2 was recognized using consensus clustering for these four PRGs. Patients from cluster 1 had a favourable prognosis and diverse immune cell infiltrations. A nomogram was developed based on age, TNM stage, tumour subtype and pyroptosis score. Patients with the high‐risk group exhibited worse 5‐year OS, and the result was consistent in the external cohort. Additionally, high‐risk group patients were associated with downregulated immune checkpoint expression. Further analysis suggested that the high‐risk group patients were associated with a higher IC50 of paclitaxel, doxorubicin, cisplatin, methotrexate and vinorelbine. In summarizing, the pyroptosis score‐based nomogram might serve as an independent prognostic predictor and could guide medication for chemotherapy. Additionally, it may bring novel insight into the regulation of tumour immune microenvironment in BC and help to achieve precision immunotherapy.
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spelling pubmed-89954422022-04-15 Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target Luo, Jiayue Lai, Jianguo J Cell Mol Med Original Articles The underlying role of pyroptosis in breast cancer (BC) remains unknown. Herein, we investigated the correlations of 33 pyroptosis‐related genes (PRGs) with immune checkpoints and immune cell infiltrations in BC patients based on The Cancer Genome Atlas cohort (n = 996) and Gene Expression Omnibus cohort (n = 3,262). Enrichment analysis revealed that these PRGs mainly functioned in pyroptosis, inflammasomes and regulation of autophagy pathway. Four prognostic independent PRGs (CASP9, TIRAP, GSDMC and IL18) were identified. Then, cluster 1/2 was recognized using consensus clustering for these four PRGs. Patients from cluster 1 had a favourable prognosis and diverse immune cell infiltrations. A nomogram was developed based on age, TNM stage, tumour subtype and pyroptosis score. Patients with the high‐risk group exhibited worse 5‐year OS, and the result was consistent in the external cohort. Additionally, high‐risk group patients were associated with downregulated immune checkpoint expression. Further analysis suggested that the high‐risk group patients were associated with a higher IC50 of paclitaxel, doxorubicin, cisplatin, methotrexate and vinorelbine. In summarizing, the pyroptosis score‐based nomogram might serve as an independent prognostic predictor and could guide medication for chemotherapy. Additionally, it may bring novel insight into the regulation of tumour immune microenvironment in BC and help to achieve precision immunotherapy. John Wiley and Sons Inc. 2022-03-01 2022-04 /pmc/articles/PMC8995442/ /pubmed/35233921 http://dx.doi.org/10.1111/jcmm.17247 Text en © 2022 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Luo, Jiayue
Lai, Jianguo
Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target
title Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target
title_full Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target
title_fullStr Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target
title_full_unstemmed Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target
title_short Pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: A novel therapeutic target
title_sort pyroptosis‐related molecular classification and immune microenvironment infiltration in breast cancer: a novel therapeutic target
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8995442/
https://www.ncbi.nlm.nih.gov/pubmed/35233921
http://dx.doi.org/10.1111/jcmm.17247
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