Cargando…

Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine

Alzheimer’s disease (AD) is a degenerative disease of the central nervous system characterized by memory and cognitive dysfunction, as well as abnormal changes in behavior and personality. The research focused on how machine learning classified AD became a recent hotspot. In this study, we proposed...

Descripción completa

Detalles Bibliográficos
Autores principales: Meng, Xianglian, Wu, Yue, Liu, Wenjie, Wang, Ying, Xu, Zhe, Jiao, Zhuqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8995748/
https://www.ncbi.nlm.nih.gov/pubmed/35418845
http://dx.doi.org/10.3389/fninf.2022.856295
_version_ 1784684348258123776
author Meng, Xianglian
Wu, Yue
Liu, Wenjie
Wang, Ying
Xu, Zhe
Jiao, Zhuqing
author_facet Meng, Xianglian
Wu, Yue
Liu, Wenjie
Wang, Ying
Xu, Zhe
Jiao, Zhuqing
author_sort Meng, Xianglian
collection PubMed
description Alzheimer’s disease (AD) is a degenerative disease of the central nervous system characterized by memory and cognitive dysfunction, as well as abnormal changes in behavior and personality. The research focused on how machine learning classified AD became a recent hotspot. In this study, we proposed a novel voxel-based feature detection framework for AD. Specifically, using 649 voxel-based morphometry (VBM) methods obtained from MRI in Alzheimer’s Disease Neuroimaging Initiative (ADNI), we proposed a feature detection method according to the Random Survey Support Vector Machines (RS-SVM) and combined the research process based on image-, gene-, and pathway-level analysis for AD prediction. Particularly, we constructed 136, 141, and 113 novel voxel-based features for EMCI (early mild cognitive impairment)-HC (healthy control), LMCI (late mild cognitive impairment)-HC, and AD-HC groups, respectively. We applied linear regression model, least absolute shrinkage and selection operator (Lasso), partial least squares (PLS), SVM, and RS-SVM five methods to test and compare the accuracy of these features in these three groups. The prediction accuracy of the AD-HC group using the RS-SVM method was higher than 90%. In addition, we performed functional analysis of the features to explain the biological significance. The experimental results using five machine learning indicate that the identified features are effective for AD and HC classification, the RS-SVM framework has the best classification accuracy, and our strategy can identify important brain regions for AD.
format Online
Article
Text
id pubmed-8995748
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-89957482022-04-12 Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine Meng, Xianglian Wu, Yue Liu, Wenjie Wang, Ying Xu, Zhe Jiao, Zhuqing Front Neuroinform Neuroscience Alzheimer’s disease (AD) is a degenerative disease of the central nervous system characterized by memory and cognitive dysfunction, as well as abnormal changes in behavior and personality. The research focused on how machine learning classified AD became a recent hotspot. In this study, we proposed a novel voxel-based feature detection framework for AD. Specifically, using 649 voxel-based morphometry (VBM) methods obtained from MRI in Alzheimer’s Disease Neuroimaging Initiative (ADNI), we proposed a feature detection method according to the Random Survey Support Vector Machines (RS-SVM) and combined the research process based on image-, gene-, and pathway-level analysis for AD prediction. Particularly, we constructed 136, 141, and 113 novel voxel-based features for EMCI (early mild cognitive impairment)-HC (healthy control), LMCI (late mild cognitive impairment)-HC, and AD-HC groups, respectively. We applied linear regression model, least absolute shrinkage and selection operator (Lasso), partial least squares (PLS), SVM, and RS-SVM five methods to test and compare the accuracy of these features in these three groups. The prediction accuracy of the AD-HC group using the RS-SVM method was higher than 90%. In addition, we performed functional analysis of the features to explain the biological significance. The experimental results using five machine learning indicate that the identified features are effective for AD and HC classification, the RS-SVM framework has the best classification accuracy, and our strategy can identify important brain regions for AD. Frontiers Media S.A. 2022-03-28 /pmc/articles/PMC8995748/ /pubmed/35418845 http://dx.doi.org/10.3389/fninf.2022.856295 Text en Copyright © 2022 Meng, Wu, Liu, Wang, Xu and Jiao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Meng, Xianglian
Wu, Yue
Liu, Wenjie
Wang, Ying
Xu, Zhe
Jiao, Zhuqing
Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine
title Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine
title_full Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine
title_fullStr Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine
title_full_unstemmed Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine
title_short Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine
title_sort research on voxel-based features detection and analysis of alzheimer’s disease using random survey support vector machine
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8995748/
https://www.ncbi.nlm.nih.gov/pubmed/35418845
http://dx.doi.org/10.3389/fninf.2022.856295
work_keys_str_mv AT mengxianglian researchonvoxelbasedfeaturesdetectionandanalysisofalzheimersdiseaseusingrandomsurveysupportvectormachine
AT wuyue researchonvoxelbasedfeaturesdetectionandanalysisofalzheimersdiseaseusingrandomsurveysupportvectormachine
AT liuwenjie researchonvoxelbasedfeaturesdetectionandanalysisofalzheimersdiseaseusingrandomsurveysupportvectormachine
AT wangying researchonvoxelbasedfeaturesdetectionandanalysisofalzheimersdiseaseusingrandomsurveysupportvectormachine
AT xuzhe researchonvoxelbasedfeaturesdetectionandanalysisofalzheimersdiseaseusingrandomsurveysupportvectormachine
AT jiaozhuqing researchonvoxelbasedfeaturesdetectionandanalysisofalzheimersdiseaseusingrandomsurveysupportvectormachine