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Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma

Background: The biological significance of RNA N6-methyladenosine (m6A) decoration in tumorigenicity and progression has been highlighted in recent studies, but whether m6A modification plays a potential role in tumor microenvironment (TME) formation and immune regulation in lung adenocarcinoma (LUA...

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Autores principales: Xie, Lingling, Dai, Rongyang, Wang, Xudong, Xie, Guangfei, Gao, Zhihua, Xu, Xinxin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8995862/
https://www.ncbi.nlm.nih.gov/pubmed/35419413
http://dx.doi.org/10.3389/fmolb.2022.806780
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author Xie, Lingling
Dai, Rongyang
Wang, Xudong
Xie, Guangfei
Gao, Zhihua
Xu, Xinxin
author_facet Xie, Lingling
Dai, Rongyang
Wang, Xudong
Xie, Guangfei
Gao, Zhihua
Xu, Xinxin
author_sort Xie, Lingling
collection PubMed
description Background: The biological significance of RNA N6-methyladenosine (m6A) decoration in tumorigenicity and progression has been highlighted in recent studies, but whether m6A modification plays a potential role in tumor microenvironment (TME) formation and immune regulation in lung adenocarcinoma (LUAD) remains unclear. Methods: m6A modification features were evaluated by analyzing the multi-omics features of 17 m6A regulators in over 1900 LUAD samples, and at the same time, the correlation between these modification patterns and TME characteristics was analyzed. An m6A score signature–based principal component analysis (PCA) algorithm was constructed to assess the prognosis and responses of individual patients to immunotherapeutic and targeted therapies. Results: Three different m6A modification patterns were determined in 1901 LUAD samples, which were found to be related to diverse clinical outcomes via different biological pathways. Based on the m6A score extracted from the m6A-associated signature genes, LUAD patients were separated into high- and low-m6A score groups. It was discovered that patients with high m6A scores had longer survival, lower tumor mutation loads, and low PD-L1/PDCD1/CTLA4/TAG3 expression level. In addition, LUAD patients with high m6A scores displayed lower IC(50) to some targeted drugs, including nilotinib, erlotinib, imatinib, and lapatinib. Conclusion: m6A modification was significantly associated with the TME and clinical outcomes. These findings may help gain more insights into the role of m6A decoration in the molecular mechanism of LUAD, thus facilitating the development of more effective personalized treatment strategies.
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spelling pubmed-89958622022-04-12 Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma Xie, Lingling Dai, Rongyang Wang, Xudong Xie, Guangfei Gao, Zhihua Xu, Xinxin Front Mol Biosci Molecular Biosciences Background: The biological significance of RNA N6-methyladenosine (m6A) decoration in tumorigenicity and progression has been highlighted in recent studies, but whether m6A modification plays a potential role in tumor microenvironment (TME) formation and immune regulation in lung adenocarcinoma (LUAD) remains unclear. Methods: m6A modification features were evaluated by analyzing the multi-omics features of 17 m6A regulators in over 1900 LUAD samples, and at the same time, the correlation between these modification patterns and TME characteristics was analyzed. An m6A score signature–based principal component analysis (PCA) algorithm was constructed to assess the prognosis and responses of individual patients to immunotherapeutic and targeted therapies. Results: Three different m6A modification patterns were determined in 1901 LUAD samples, which were found to be related to diverse clinical outcomes via different biological pathways. Based on the m6A score extracted from the m6A-associated signature genes, LUAD patients were separated into high- and low-m6A score groups. It was discovered that patients with high m6A scores had longer survival, lower tumor mutation loads, and low PD-L1/PDCD1/CTLA4/TAG3 expression level. In addition, LUAD patients with high m6A scores displayed lower IC(50) to some targeted drugs, including nilotinib, erlotinib, imatinib, and lapatinib. Conclusion: m6A modification was significantly associated with the TME and clinical outcomes. These findings may help gain more insights into the role of m6A decoration in the molecular mechanism of LUAD, thus facilitating the development of more effective personalized treatment strategies. Frontiers Media S.A. 2022-03-28 /pmc/articles/PMC8995862/ /pubmed/35419413 http://dx.doi.org/10.3389/fmolb.2022.806780 Text en Copyright © 2022 Xie, Dai, Wang, Xie, Gao and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Xie, Lingling
Dai, Rongyang
Wang, Xudong
Xie, Guangfei
Gao, Zhihua
Xu, Xinxin
Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma
title Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma
title_full Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma
title_fullStr Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma
title_full_unstemmed Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma
title_short Comprehensive Analysis Revealed the Potential Implications of m6A Regulators in Lung Adenocarcinoma
title_sort comprehensive analysis revealed the potential implications of m6a regulators in lung adenocarcinoma
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8995862/
https://www.ncbi.nlm.nih.gov/pubmed/35419413
http://dx.doi.org/10.3389/fmolb.2022.806780
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