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Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE

BACKGROUND: Systematic reviews (SRs) are valuable resources as they address specific clinical questions by summarizing all existing relevant studies. However, finding all information to include in systematic reviews can be challenging. Methodological search filters have been developed to find articl...

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Autores principales: Stallings, Elena, Gaetano-Gil, Andrea, Alvarez-Diaz, Noelia, Solà, Ivan, López-Alcalde, Jesús, Molano, Daniel, Zamora, Javier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8996648/
https://www.ncbi.nlm.nih.gov/pubmed/35399050
http://dx.doi.org/10.1186/s12874-022-01595-9
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author Stallings, Elena
Gaetano-Gil, Andrea
Alvarez-Diaz, Noelia
Solà, Ivan
López-Alcalde, Jesús
Molano, Daniel
Zamora, Javier
author_facet Stallings, Elena
Gaetano-Gil, Andrea
Alvarez-Diaz, Noelia
Solà, Ivan
López-Alcalde, Jesús
Molano, Daniel
Zamora, Javier
author_sort Stallings, Elena
collection PubMed
description BACKGROUND: Systematic reviews (SRs) are valuable resources as they address specific clinical questions by summarizing all existing relevant studies. However, finding all information to include in systematic reviews can be challenging. Methodological search filters have been developed to find articles related to specific clinical questions. To our knowledge, no filter exists for finding studies on the role of prognostic factor (PF). We aimed to develop and evaluate a search filter to identify PF studies in Ovid MEDLINE that has maximum sensitivity. METHODS: We followed current recommendations for the development of a search filter by first identifying a reference set of PF studies included in relevant systematic reviews on the topic, and by selecting search terms using a word frequency analysis complemented with an expert panel discussion. We evaluated filter performance using the relative recall methodology. RESULTS: We constructed a reference set of 73 studies included in six systematic reviews from a larger sample. After completing a word frequency analysis using the reference set studies, we compiled a list of 80 of the frequent methodological terms. This list of terms was evaluated by the Delphi panel for inclusion in the filter, resulting in a final set of 8 appropriate terms. The consecutive connection of these terms with the Boolean operator OR produced the filter. We then evaluated the filter using the relative recall method against the reference set, comparing the references included in the SRs with our new search using the filter. The overall sensitivity of the filter was calculated to be 95%, while the overall specificity was 41%. The precision of the filter varied considerably, ranging from 0.36 to 17%. The NNR (number needed to read) value varied largely from 6 to 278. The time saved by using the filter ranged from 13–70%. CONCLUSIONS: We developed a search filter for OVID-Medline with acceptable performance that could be used in systematic reviews of PF studies. Using this filter could save as much as 40% of the title and abstract screening task. The specificity of the filter could be improved by defining additional terms to be included, although it is important to evaluate any modification to guarantee the filter is still highly sensitive. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01595-9.
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spelling pubmed-89966482022-04-12 Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE Stallings, Elena Gaetano-Gil, Andrea Alvarez-Diaz, Noelia Solà, Ivan López-Alcalde, Jesús Molano, Daniel Zamora, Javier BMC Med Res Methodol Research BACKGROUND: Systematic reviews (SRs) are valuable resources as they address specific clinical questions by summarizing all existing relevant studies. However, finding all information to include in systematic reviews can be challenging. Methodological search filters have been developed to find articles related to specific clinical questions. To our knowledge, no filter exists for finding studies on the role of prognostic factor (PF). We aimed to develop and evaluate a search filter to identify PF studies in Ovid MEDLINE that has maximum sensitivity. METHODS: We followed current recommendations for the development of a search filter by first identifying a reference set of PF studies included in relevant systematic reviews on the topic, and by selecting search terms using a word frequency analysis complemented with an expert panel discussion. We evaluated filter performance using the relative recall methodology. RESULTS: We constructed a reference set of 73 studies included in six systematic reviews from a larger sample. After completing a word frequency analysis using the reference set studies, we compiled a list of 80 of the frequent methodological terms. This list of terms was evaluated by the Delphi panel for inclusion in the filter, resulting in a final set of 8 appropriate terms. The consecutive connection of these terms with the Boolean operator OR produced the filter. We then evaluated the filter using the relative recall method against the reference set, comparing the references included in the SRs with our new search using the filter. The overall sensitivity of the filter was calculated to be 95%, while the overall specificity was 41%. The precision of the filter varied considerably, ranging from 0.36 to 17%. The NNR (number needed to read) value varied largely from 6 to 278. The time saved by using the filter ranged from 13–70%. CONCLUSIONS: We developed a search filter for OVID-Medline with acceptable performance that could be used in systematic reviews of PF studies. Using this filter could save as much as 40% of the title and abstract screening task. The specificity of the filter could be improved by defining additional terms to be included, although it is important to evaluate any modification to guarantee the filter is still highly sensitive. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01595-9. BioMed Central 2022-04-10 /pmc/articles/PMC8996648/ /pubmed/35399050 http://dx.doi.org/10.1186/s12874-022-01595-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Stallings, Elena
Gaetano-Gil, Andrea
Alvarez-Diaz, Noelia
Solà, Ivan
López-Alcalde, Jesús
Molano, Daniel
Zamora, Javier
Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE
title Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE
title_full Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE
title_fullStr Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE
title_full_unstemmed Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE
title_short Development and evaluation of a search filter to identify prognostic factor studies in Ovid MEDLINE
title_sort development and evaluation of a search filter to identify prognostic factor studies in ovid medline
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8996648/
https://www.ncbi.nlm.nih.gov/pubmed/35399050
http://dx.doi.org/10.1186/s12874-022-01595-9
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