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Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity
SIMPLE SUMMARY: Tumoral heterogeneity, which is a major challenge in therapy planning, is often characterized by genetic alterations. In this study, an image-based approach was used to identify metastases subtypes by radiomics features. Feature selection and reduction using Pearson correlation thres...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8997087/ https://www.ncbi.nlm.nih.gov/pubmed/35406418 http://dx.doi.org/10.3390/cancers14071646 |
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author | Tharmaseelan, Hishan Hertel, Alexander Tollens, Fabian Rink, Johann Woźnicki, Piotr Haselmann, Verena Ayx, Isabelle Nörenberg, Dominik Schoenberg, Stefan O. Froelich, Matthias F. |
author_facet | Tharmaseelan, Hishan Hertel, Alexander Tollens, Fabian Rink, Johann Woźnicki, Piotr Haselmann, Verena Ayx, Isabelle Nörenberg, Dominik Schoenberg, Stefan O. Froelich, Matthias F. |
author_sort | Tharmaseelan, Hishan |
collection | PubMed |
description | SIMPLE SUMMARY: Tumoral heterogeneity, which is a major challenge in therapy planning, is often characterized by genetic alterations. In this study, an image-based approach was used to identify metastases subtypes by radiomics features. Feature selection and reduction using Pearson correlation threshold and LASSO regression resulted in four final features. After unsupervised clustering and following visual assessment, five lesion clusters could be identified and defined, which had a significant (p < 0.01) correlation with sex, primary location, T- and N-status, and mutational status. ABSTRACT: (1) Background: Tumoral heterogeneity (TH) is a major challenge in the treatment of metastatic colorectal cancer (mCRC) and is associated with inferior response. Therefore, the identification of TH would be beneficial for treatment planning. TH can be assessed by identifying genetic alterations. In this work, a radiomics-based approach for assessment of TH in colorectal liver metastases (CRLM) in CT scans is demonstrated. (2) Methods: In this retrospective study, CRLM of mCRC were segmented and radiomics features extracted using pyradiomics. Unsupervised k-means clustering was applied to features and lesions. Feature redundancy was evaluated by principal component analysis and reduced by Pearson correlation coefficient cutoff. Feature selection was conducted by LASSO regression and visual analysis of the clusters by radiologists. (3) Results: A total of 47 patients’ (36% female, median age 64) CTs with 261 lesions were included. Five clusters were identified, and the categories small disseminated (n = 31), heterogeneous (n = 105), homogeneous (n = 64), mixed (n = 59), and very large type (n = 2) were assigned based on visual characteristics. Further statistical analysis showed correlation (p < 0.01) of clusters with sex, primary location, T- and N-status, and mutational status. Feature reduction and selection resulted in the identification of four features as a final set for cluster definition. (4) Conclusions: Radiomics features can characterize TH in liver metastases of mCRC in CT scans, and may be suitable for a better pretherapeutic classification of liver lesion phenotypes. |
format | Online Article Text |
id | pubmed-8997087 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-89970872022-04-12 Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity Tharmaseelan, Hishan Hertel, Alexander Tollens, Fabian Rink, Johann Woźnicki, Piotr Haselmann, Verena Ayx, Isabelle Nörenberg, Dominik Schoenberg, Stefan O. Froelich, Matthias F. Cancers (Basel) Article SIMPLE SUMMARY: Tumoral heterogeneity, which is a major challenge in therapy planning, is often characterized by genetic alterations. In this study, an image-based approach was used to identify metastases subtypes by radiomics features. Feature selection and reduction using Pearson correlation threshold and LASSO regression resulted in four final features. After unsupervised clustering and following visual assessment, five lesion clusters could be identified and defined, which had a significant (p < 0.01) correlation with sex, primary location, T- and N-status, and mutational status. ABSTRACT: (1) Background: Tumoral heterogeneity (TH) is a major challenge in the treatment of metastatic colorectal cancer (mCRC) and is associated with inferior response. Therefore, the identification of TH would be beneficial for treatment planning. TH can be assessed by identifying genetic alterations. In this work, a radiomics-based approach for assessment of TH in colorectal liver metastases (CRLM) in CT scans is demonstrated. (2) Methods: In this retrospective study, CRLM of mCRC were segmented and radiomics features extracted using pyradiomics. Unsupervised k-means clustering was applied to features and lesions. Feature redundancy was evaluated by principal component analysis and reduced by Pearson correlation coefficient cutoff. Feature selection was conducted by LASSO regression and visual analysis of the clusters by radiologists. (3) Results: A total of 47 patients’ (36% female, median age 64) CTs with 261 lesions were included. Five clusters were identified, and the categories small disseminated (n = 31), heterogeneous (n = 105), homogeneous (n = 64), mixed (n = 59), and very large type (n = 2) were assigned based on visual characteristics. Further statistical analysis showed correlation (p < 0.01) of clusters with sex, primary location, T- and N-status, and mutational status. Feature reduction and selection resulted in the identification of four features as a final set for cluster definition. (4) Conclusions: Radiomics features can characterize TH in liver metastases of mCRC in CT scans, and may be suitable for a better pretherapeutic classification of liver lesion phenotypes. MDPI 2022-03-24 /pmc/articles/PMC8997087/ /pubmed/35406418 http://dx.doi.org/10.3390/cancers14071646 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tharmaseelan, Hishan Hertel, Alexander Tollens, Fabian Rink, Johann Woźnicki, Piotr Haselmann, Verena Ayx, Isabelle Nörenberg, Dominik Schoenberg, Stefan O. Froelich, Matthias F. Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity |
title | Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity |
title_full | Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity |
title_fullStr | Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity |
title_full_unstemmed | Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity |
title_short | Identification of CT Imaging Phenotypes of Colorectal Liver Metastases from Radiomics Signatures—Towards Assessment of Interlesional Tumor Heterogeneity |
title_sort | identification of ct imaging phenotypes of colorectal liver metastases from radiomics signatures—towards assessment of interlesional tumor heterogeneity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8997087/ https://www.ncbi.nlm.nih.gov/pubmed/35406418 http://dx.doi.org/10.3390/cancers14071646 |
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