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Performance of early warning signals for disease re-emergence: A case study on COVID-19 data
Developing measures for rapid and early detection of disease re-emergence is important to perform science-based risk assessment of epidemic threats. In the past few years, several early warning signals (EWS) from complex systems theory have been introduced to detect impending critical transitions an...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9000113/ https://www.ncbi.nlm.nih.gov/pubmed/35353809 http://dx.doi.org/10.1371/journal.pcbi.1009958 |
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author | Proverbio, Daniele Kemp, Françoise Magni, Stefano Gonçalves, Jorge |
author_facet | Proverbio, Daniele Kemp, Françoise Magni, Stefano Gonçalves, Jorge |
author_sort | Proverbio, Daniele |
collection | PubMed |
description | Developing measures for rapid and early detection of disease re-emergence is important to perform science-based risk assessment of epidemic threats. In the past few years, several early warning signals (EWS) from complex systems theory have been introduced to detect impending critical transitions and extend the set of indicators. However, it is still debated whether they are generically applicable or potentially sensitive to some dynamical characteristics such as system noise and rates of approach to critical parameter values. Moreover, testing on empirical data has, so far, been limited. Hence, verifying EWS performance remains a challenge. In this study, we tackle this question by analyzing the performance of common EWS, such as increasing variance and autocorrelation, in detecting the emergence of COVID-19 outbreaks in various countries. Our work illustrates that these EWS might be successful in detecting disease emergence when some basic assumptions are satisfied: a slow forcing through the transitions and not-fat-tailed noise. In uncertain cases, we observe that noise properties or commensurable time scales may obscure the expected early warning signals. Overall, our results suggest that EWS can be useful for active monitoring of epidemic dynamics, but that their performance is sensitive to certain features of the underlying dynamics. Our findings thus pave a connection between theoretical and empirical studies, constituting a further step towards the application of EWS indicators for informing public health policies. |
format | Online Article Text |
id | pubmed-9000113 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-90001132022-04-12 Performance of early warning signals for disease re-emergence: A case study on COVID-19 data Proverbio, Daniele Kemp, Françoise Magni, Stefano Gonçalves, Jorge PLoS Comput Biol Research Article Developing measures for rapid and early detection of disease re-emergence is important to perform science-based risk assessment of epidemic threats. In the past few years, several early warning signals (EWS) from complex systems theory have been introduced to detect impending critical transitions and extend the set of indicators. However, it is still debated whether they are generically applicable or potentially sensitive to some dynamical characteristics such as system noise and rates of approach to critical parameter values. Moreover, testing on empirical data has, so far, been limited. Hence, verifying EWS performance remains a challenge. In this study, we tackle this question by analyzing the performance of common EWS, such as increasing variance and autocorrelation, in detecting the emergence of COVID-19 outbreaks in various countries. Our work illustrates that these EWS might be successful in detecting disease emergence when some basic assumptions are satisfied: a slow forcing through the transitions and not-fat-tailed noise. In uncertain cases, we observe that noise properties or commensurable time scales may obscure the expected early warning signals. Overall, our results suggest that EWS can be useful for active monitoring of epidemic dynamics, but that their performance is sensitive to certain features of the underlying dynamics. Our findings thus pave a connection between theoretical and empirical studies, constituting a further step towards the application of EWS indicators for informing public health policies. Public Library of Science 2022-03-30 /pmc/articles/PMC9000113/ /pubmed/35353809 http://dx.doi.org/10.1371/journal.pcbi.1009958 Text en © 2022 Proverbio et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Proverbio, Daniele Kemp, Françoise Magni, Stefano Gonçalves, Jorge Performance of early warning signals for disease re-emergence: A case study on COVID-19 data |
title | Performance of early warning signals for disease re-emergence: A case study on COVID-19 data |
title_full | Performance of early warning signals for disease re-emergence: A case study on COVID-19 data |
title_fullStr | Performance of early warning signals for disease re-emergence: A case study on COVID-19 data |
title_full_unstemmed | Performance of early warning signals for disease re-emergence: A case study on COVID-19 data |
title_short | Performance of early warning signals for disease re-emergence: A case study on COVID-19 data |
title_sort | performance of early warning signals for disease re-emergence: a case study on covid-19 data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9000113/ https://www.ncbi.nlm.nih.gov/pubmed/35353809 http://dx.doi.org/10.1371/journal.pcbi.1009958 |
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