Cargando…

Performance of early warning signals for disease re-emergence: A case study on COVID-19 data

Developing measures for rapid and early detection of disease re-emergence is important to perform science-based risk assessment of epidemic threats. In the past few years, several early warning signals (EWS) from complex systems theory have been introduced to detect impending critical transitions an...

Descripción completa

Detalles Bibliográficos
Autores principales: Proverbio, Daniele, Kemp, Françoise, Magni, Stefano, Gonçalves, Jorge
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9000113/
https://www.ncbi.nlm.nih.gov/pubmed/35353809
http://dx.doi.org/10.1371/journal.pcbi.1009958
_version_ 1784685355317854208
author Proverbio, Daniele
Kemp, Françoise
Magni, Stefano
Gonçalves, Jorge
author_facet Proverbio, Daniele
Kemp, Françoise
Magni, Stefano
Gonçalves, Jorge
author_sort Proverbio, Daniele
collection PubMed
description Developing measures for rapid and early detection of disease re-emergence is important to perform science-based risk assessment of epidemic threats. In the past few years, several early warning signals (EWS) from complex systems theory have been introduced to detect impending critical transitions and extend the set of indicators. However, it is still debated whether they are generically applicable or potentially sensitive to some dynamical characteristics such as system noise and rates of approach to critical parameter values. Moreover, testing on empirical data has, so far, been limited. Hence, verifying EWS performance remains a challenge. In this study, we tackle this question by analyzing the performance of common EWS, such as increasing variance and autocorrelation, in detecting the emergence of COVID-19 outbreaks in various countries. Our work illustrates that these EWS might be successful in detecting disease emergence when some basic assumptions are satisfied: a slow forcing through the transitions and not-fat-tailed noise. In uncertain cases, we observe that noise properties or commensurable time scales may obscure the expected early warning signals. Overall, our results suggest that EWS can be useful for active monitoring of epidemic dynamics, but that their performance is sensitive to certain features of the underlying dynamics. Our findings thus pave a connection between theoretical and empirical studies, constituting a further step towards the application of EWS indicators for informing public health policies.
format Online
Article
Text
id pubmed-9000113
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-90001132022-04-12 Performance of early warning signals for disease re-emergence: A case study on COVID-19 data Proverbio, Daniele Kemp, Françoise Magni, Stefano Gonçalves, Jorge PLoS Comput Biol Research Article Developing measures for rapid and early detection of disease re-emergence is important to perform science-based risk assessment of epidemic threats. In the past few years, several early warning signals (EWS) from complex systems theory have been introduced to detect impending critical transitions and extend the set of indicators. However, it is still debated whether they are generically applicable or potentially sensitive to some dynamical characteristics such as system noise and rates of approach to critical parameter values. Moreover, testing on empirical data has, so far, been limited. Hence, verifying EWS performance remains a challenge. In this study, we tackle this question by analyzing the performance of common EWS, such as increasing variance and autocorrelation, in detecting the emergence of COVID-19 outbreaks in various countries. Our work illustrates that these EWS might be successful in detecting disease emergence when some basic assumptions are satisfied: a slow forcing through the transitions and not-fat-tailed noise. In uncertain cases, we observe that noise properties or commensurable time scales may obscure the expected early warning signals. Overall, our results suggest that EWS can be useful for active monitoring of epidemic dynamics, but that their performance is sensitive to certain features of the underlying dynamics. Our findings thus pave a connection between theoretical and empirical studies, constituting a further step towards the application of EWS indicators for informing public health policies. Public Library of Science 2022-03-30 /pmc/articles/PMC9000113/ /pubmed/35353809 http://dx.doi.org/10.1371/journal.pcbi.1009958 Text en © 2022 Proverbio et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Proverbio, Daniele
Kemp, Françoise
Magni, Stefano
Gonçalves, Jorge
Performance of early warning signals for disease re-emergence: A case study on COVID-19 data
title Performance of early warning signals for disease re-emergence: A case study on COVID-19 data
title_full Performance of early warning signals for disease re-emergence: A case study on COVID-19 data
title_fullStr Performance of early warning signals for disease re-emergence: A case study on COVID-19 data
title_full_unstemmed Performance of early warning signals for disease re-emergence: A case study on COVID-19 data
title_short Performance of early warning signals for disease re-emergence: A case study on COVID-19 data
title_sort performance of early warning signals for disease re-emergence: a case study on covid-19 data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9000113/
https://www.ncbi.nlm.nih.gov/pubmed/35353809
http://dx.doi.org/10.1371/journal.pcbi.1009958
work_keys_str_mv AT proverbiodaniele performanceofearlywarningsignalsfordiseasereemergenceacasestudyoncovid19data
AT kempfrancoise performanceofearlywarningsignalsfordiseasereemergenceacasestudyoncovid19data
AT magnistefano performanceofearlywarningsignalsfordiseasereemergenceacasestudyoncovid19data
AT goncalvesjorge performanceofearlywarningsignalsfordiseasereemergenceacasestudyoncovid19data