Cargando…

Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals

Boron (B) is an essential micronutrient of plants. Plants grapple with a narrow range of B between its toxicity and deficiency. B homeostasis mechanism is required to rescue plants from such a quagmire. B transporters are specialized proteins involved in the homeostasis of B. In the present study, a...

Descripción completa

Detalles Bibliográficos
Autores principales: Sharma, Himanshu, Sharma, Alok, Rajput, Ruchika, Sidhu, Sukhjeet, Dhillon, Harpal, Verma, Praveen Chandra, Pandey, Ashutosh, Upadhyay, Santosh Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9002812/
https://www.ncbi.nlm.nih.gov/pubmed/35406892
http://dx.doi.org/10.3390/plants11070911
_version_ 1784685980187361280
author Sharma, Himanshu
Sharma, Alok
Rajput, Ruchika
Sidhu, Sukhjeet
Dhillon, Harpal
Verma, Praveen Chandra
Pandey, Ashutosh
Upadhyay, Santosh Kumar
author_facet Sharma, Himanshu
Sharma, Alok
Rajput, Ruchika
Sidhu, Sukhjeet
Dhillon, Harpal
Verma, Praveen Chandra
Pandey, Ashutosh
Upadhyay, Santosh Kumar
author_sort Sharma, Himanshu
collection PubMed
description Boron (B) is an essential micronutrient of plants. Plants grapple with a narrow range of B between its toxicity and deficiency. B homeostasis mechanism is required to rescue plants from such a quagmire. B transporters are specialized proteins involved in the homeostasis of B. In the present study, a total of 29 BOR genes were identified in five major cereals, including three BORs in each Brachypodium distachyon and Sorghum bicolor, four in Oryza sativa, six in Zea mays, and 13 in Triticum aestivum. Multiple sequence alignments, domain structure analyses, and phylogenetic analysis indicated the conserved nature of the BOR protein family. Duplication events and Ka/Ks analysis of TaBORs showed the role of segmental duplication events and purifying selection in the expansion of the BOR family in T. aestivum. Furthermore, in silico expression and co-expression analyses under biotic and abiotic stress conditions depicted their involvement in combating such conditions. Moreover, qRT-PCR of TaBORs in B treatment suggested the roles of BOR genes in B stress management. The present study hints at the conserved nature of BOR proteins and their different aspects. The study will lay down a way for several crop improvement programs.
format Online
Article
Text
id pubmed-9002812
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-90028122022-04-13 Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals Sharma, Himanshu Sharma, Alok Rajput, Ruchika Sidhu, Sukhjeet Dhillon, Harpal Verma, Praveen Chandra Pandey, Ashutosh Upadhyay, Santosh Kumar Plants (Basel) Article Boron (B) is an essential micronutrient of plants. Plants grapple with a narrow range of B between its toxicity and deficiency. B homeostasis mechanism is required to rescue plants from such a quagmire. B transporters are specialized proteins involved in the homeostasis of B. In the present study, a total of 29 BOR genes were identified in five major cereals, including three BORs in each Brachypodium distachyon and Sorghum bicolor, four in Oryza sativa, six in Zea mays, and 13 in Triticum aestivum. Multiple sequence alignments, domain structure analyses, and phylogenetic analysis indicated the conserved nature of the BOR protein family. Duplication events and Ka/Ks analysis of TaBORs showed the role of segmental duplication events and purifying selection in the expansion of the BOR family in T. aestivum. Furthermore, in silico expression and co-expression analyses under biotic and abiotic stress conditions depicted their involvement in combating such conditions. Moreover, qRT-PCR of TaBORs in B treatment suggested the roles of BOR genes in B stress management. The present study hints at the conserved nature of BOR proteins and their different aspects. The study will lay down a way for several crop improvement programs. MDPI 2022-03-29 /pmc/articles/PMC9002812/ /pubmed/35406892 http://dx.doi.org/10.3390/plants11070911 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sharma, Himanshu
Sharma, Alok
Rajput, Ruchika
Sidhu, Sukhjeet
Dhillon, Harpal
Verma, Praveen Chandra
Pandey, Ashutosh
Upadhyay, Santosh Kumar
Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals
title Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals
title_full Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals
title_fullStr Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals
title_full_unstemmed Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals
title_short Molecular Characterization, Evolutionary Analysis, and Expression Profiling of BOR Genes in Important Cereals
title_sort molecular characterization, evolutionary analysis, and expression profiling of bor genes in important cereals
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9002812/
https://www.ncbi.nlm.nih.gov/pubmed/35406892
http://dx.doi.org/10.3390/plants11070911
work_keys_str_mv AT sharmahimanshu molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals
AT sharmaalok molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals
AT rajputruchika molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals
AT sidhusukhjeet molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals
AT dhillonharpal molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals
AT vermapraveenchandra molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals
AT pandeyashutosh molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals
AT upadhyaysantoshkumar molecularcharacterizationevolutionaryanalysisandexpressionprofilingofborgenesinimportantcereals