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Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2) ‐binding domain
The Phosphatase and TENsin homolog deleted on chromosome 10 (PTEN) is a chief regulator of a variety of cellular processes including cell proliferation, migration, growth, and death. It is also a major tumor suppressor gene that is frequently mutated or lost under cancerous conditions. PTEN encodes...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9004235/ https://www.ncbi.nlm.nih.gov/pubmed/35481646 http://dx.doi.org/10.1002/pro.4308 |
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author | Dawson, Jennifer E. Smith, Iris Nira Martin, William Khan, Krishnendu Cheng, Feixiong Eng, Charis |
author_facet | Dawson, Jennifer E. Smith, Iris Nira Martin, William Khan, Krishnendu Cheng, Feixiong Eng, Charis |
author_sort | Dawson, Jennifer E. |
collection | PubMed |
description | The Phosphatase and TENsin homolog deleted on chromosome 10 (PTEN) is a chief regulator of a variety of cellular processes including cell proliferation, migration, growth, and death. It is also a major tumor suppressor gene that is frequently mutated or lost under cancerous conditions. PTEN encodes a dual‐specificity (lipid and protein) phosphatase that negatively regulates the PI3K/AKT/mTOR signaling pathway where the PIP(2)‐binding domain (PBD) regulates the lipid phosphatase function. Unfortunately, despite two decades of research, a full‐length structure of PTEN remains elusive, leaving open questions regarding PTEN's disordered regions that mediate protein stability, post‐translational modifications, protein–protein interactions, while also hindering the design of small molecules that can regulate PTEN's function. Here, we utilized a combination of crosslinking mass spectrometry, in silico predicted structural modeling (including AlphaFold2), molecular docking, molecular dynamics simulations, and residue interaction network modeling to obtain structural details and molecular insight into the behavior of the PBD of PTEN. Our study shows that the PBD exists in multiple conformations which suggests its ability to regulate PTEN's variety of functions. Studying how these specific conformational substates contribute to PTEN function is imperative to defining its function in disease pathogenesis, and to delineate ways to modulate its tumor suppressor activity. |
format | Online Article Text |
id | pubmed-9004235 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-90042352022-04-15 Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2) ‐binding domain Dawson, Jennifer E. Smith, Iris Nira Martin, William Khan, Krishnendu Cheng, Feixiong Eng, Charis Protein Sci Accelerated Communications The Phosphatase and TENsin homolog deleted on chromosome 10 (PTEN) is a chief regulator of a variety of cellular processes including cell proliferation, migration, growth, and death. It is also a major tumor suppressor gene that is frequently mutated or lost under cancerous conditions. PTEN encodes a dual‐specificity (lipid and protein) phosphatase that negatively regulates the PI3K/AKT/mTOR signaling pathway where the PIP(2)‐binding domain (PBD) regulates the lipid phosphatase function. Unfortunately, despite two decades of research, a full‐length structure of PTEN remains elusive, leaving open questions regarding PTEN's disordered regions that mediate protein stability, post‐translational modifications, protein–protein interactions, while also hindering the design of small molecules that can regulate PTEN's function. Here, we utilized a combination of crosslinking mass spectrometry, in silico predicted structural modeling (including AlphaFold2), molecular docking, molecular dynamics simulations, and residue interaction network modeling to obtain structural details and molecular insight into the behavior of the PBD of PTEN. Our study shows that the PBD exists in multiple conformations which suggests its ability to regulate PTEN's variety of functions. Studying how these specific conformational substates contribute to PTEN function is imperative to defining its function in disease pathogenesis, and to delineate ways to modulate its tumor suppressor activity. John Wiley & Sons, Inc. 2022-04-12 2022-05 /pmc/articles/PMC9004235/ /pubmed/35481646 http://dx.doi.org/10.1002/pro.4308 Text en © 2022 The Authors. Protein Science published by Wiley Periodicals LLC on behalf of The Protein Society. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Accelerated Communications Dawson, Jennifer E. Smith, Iris Nira Martin, William Khan, Krishnendu Cheng, Feixiong Eng, Charis Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2) ‐binding domain |
title | Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2)
‐binding domain |
title_full | Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2)
‐binding domain |
title_fullStr | Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2)
‐binding domain |
title_full_unstemmed | Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2)
‐binding domain |
title_short | Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP(2)
‐binding domain |
title_sort | shape shifting: the multiple conformational substates of the pten n‐terminal pip(2)
‐binding domain |
topic | Accelerated Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9004235/ https://www.ncbi.nlm.nih.gov/pubmed/35481646 http://dx.doi.org/10.1002/pro.4308 |
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