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Five-gene signature predicts acute kidney injury in early kidney transplant patients
Patients with acute kidney injury (AKI) show high morbidity and mortality, and a lack of effective biomarkers increases difficulty in its early detection. Weighted gene co-expression network analysis (WGCNA) detected a total of 22 gene modules and 6 miRNA modules, of which 4 gene modules and 3 miRNA...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9004575/ https://www.ncbi.nlm.nih.gov/pubmed/35320116 http://dx.doi.org/10.18632/aging.203962 |
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author | Zhai, Xia Lou, Hongqiang Hu, Jing |
author_facet | Zhai, Xia Lou, Hongqiang Hu, Jing |
author_sort | Zhai, Xia |
collection | PubMed |
description | Patients with acute kidney injury (AKI) show high morbidity and mortality, and a lack of effective biomarkers increases difficulty in its early detection. Weighted gene co-expression network analysis (WGCNA) detected a total of 22 gene modules and 6 miRNA modules, of which 4 gene modules and 3 miRNA modules were phenotypically co-related. Functional analysis revealed that these modules were related to different molecular pathways, which mainly involved PI3K-Akt signaling pathway and ECM-receptor interaction. The brown modules related to transplantation mainly involved immune-related pathways. Finally, five genes with the highest AUC were used to establish a diagnosis and prediction model of AKI. The model showed a high area under curve (AUC) in the training set and validation set, and their prediction accuracy for AKI was as high as 100%. Similarly, the prediction accuracy of AKI after 24 h in the 0 h transplant sample was 100%. This study may provide new features for the diagnosis and prediction of AKI after kidney transplantation, and facilitate the diagnosis and drug development of AKI in kidney transplant patients. |
format | Online Article Text |
id | pubmed-9004575 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-90045752022-04-13 Five-gene signature predicts acute kidney injury in early kidney transplant patients Zhai, Xia Lou, Hongqiang Hu, Jing Aging (Albany NY) Research Paper Patients with acute kidney injury (AKI) show high morbidity and mortality, and a lack of effective biomarkers increases difficulty in its early detection. Weighted gene co-expression network analysis (WGCNA) detected a total of 22 gene modules and 6 miRNA modules, of which 4 gene modules and 3 miRNA modules were phenotypically co-related. Functional analysis revealed that these modules were related to different molecular pathways, which mainly involved PI3K-Akt signaling pathway and ECM-receptor interaction. The brown modules related to transplantation mainly involved immune-related pathways. Finally, five genes with the highest AUC were used to establish a diagnosis and prediction model of AKI. The model showed a high area under curve (AUC) in the training set and validation set, and their prediction accuracy for AKI was as high as 100%. Similarly, the prediction accuracy of AKI after 24 h in the 0 h transplant sample was 100%. This study may provide new features for the diagnosis and prediction of AKI after kidney transplantation, and facilitate the diagnosis and drug development of AKI in kidney transplant patients. Impact Journals 2022-03-23 /pmc/articles/PMC9004575/ /pubmed/35320116 http://dx.doi.org/10.18632/aging.203962 Text en Copyright: © 2022 Zhai et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhai, Xia Lou, Hongqiang Hu, Jing Five-gene signature predicts acute kidney injury in early kidney transplant patients |
title | Five-gene signature predicts acute kidney injury in early kidney transplant patients |
title_full | Five-gene signature predicts acute kidney injury in early kidney transplant patients |
title_fullStr | Five-gene signature predicts acute kidney injury in early kidney transplant patients |
title_full_unstemmed | Five-gene signature predicts acute kidney injury in early kidney transplant patients |
title_short | Five-gene signature predicts acute kidney injury in early kidney transplant patients |
title_sort | five-gene signature predicts acute kidney injury in early kidney transplant patients |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9004575/ https://www.ncbi.nlm.nih.gov/pubmed/35320116 http://dx.doi.org/10.18632/aging.203962 |
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