Cargando…

Five-gene signature predicts acute kidney injury in early kidney transplant patients

Patients with acute kidney injury (AKI) show high morbidity and mortality, and a lack of effective biomarkers increases difficulty in its early detection. Weighted gene co-expression network analysis (WGCNA) detected a total of 22 gene modules and 6 miRNA modules, of which 4 gene modules and 3 miRNA...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhai, Xia, Lou, Hongqiang, Hu, Jing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9004575/
https://www.ncbi.nlm.nih.gov/pubmed/35320116
http://dx.doi.org/10.18632/aging.203962
_version_ 1784686298418642944
author Zhai, Xia
Lou, Hongqiang
Hu, Jing
author_facet Zhai, Xia
Lou, Hongqiang
Hu, Jing
author_sort Zhai, Xia
collection PubMed
description Patients with acute kidney injury (AKI) show high morbidity and mortality, and a lack of effective biomarkers increases difficulty in its early detection. Weighted gene co-expression network analysis (WGCNA) detected a total of 22 gene modules and 6 miRNA modules, of which 4 gene modules and 3 miRNA modules were phenotypically co-related. Functional analysis revealed that these modules were related to different molecular pathways, which mainly involved PI3K-Akt signaling pathway and ECM-receptor interaction. The brown modules related to transplantation mainly involved immune-related pathways. Finally, five genes with the highest AUC were used to establish a diagnosis and prediction model of AKI. The model showed a high area under curve (AUC) in the training set and validation set, and their prediction accuracy for AKI was as high as 100%. Similarly, the prediction accuracy of AKI after 24 h in the 0 h transplant sample was 100%. This study may provide new features for the diagnosis and prediction of AKI after kidney transplantation, and facilitate the diagnosis and drug development of AKI in kidney transplant patients.
format Online
Article
Text
id pubmed-9004575
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-90045752022-04-13 Five-gene signature predicts acute kidney injury in early kidney transplant patients Zhai, Xia Lou, Hongqiang Hu, Jing Aging (Albany NY) Research Paper Patients with acute kidney injury (AKI) show high morbidity and mortality, and a lack of effective biomarkers increases difficulty in its early detection. Weighted gene co-expression network analysis (WGCNA) detected a total of 22 gene modules and 6 miRNA modules, of which 4 gene modules and 3 miRNA modules were phenotypically co-related. Functional analysis revealed that these modules were related to different molecular pathways, which mainly involved PI3K-Akt signaling pathway and ECM-receptor interaction. The brown modules related to transplantation mainly involved immune-related pathways. Finally, five genes with the highest AUC were used to establish a diagnosis and prediction model of AKI. The model showed a high area under curve (AUC) in the training set and validation set, and their prediction accuracy for AKI was as high as 100%. Similarly, the prediction accuracy of AKI after 24 h in the 0 h transplant sample was 100%. This study may provide new features for the diagnosis and prediction of AKI after kidney transplantation, and facilitate the diagnosis and drug development of AKI in kidney transplant patients. Impact Journals 2022-03-23 /pmc/articles/PMC9004575/ /pubmed/35320116 http://dx.doi.org/10.18632/aging.203962 Text en Copyright: © 2022 Zhai et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhai, Xia
Lou, Hongqiang
Hu, Jing
Five-gene signature predicts acute kidney injury in early kidney transplant patients
title Five-gene signature predicts acute kidney injury in early kidney transplant patients
title_full Five-gene signature predicts acute kidney injury in early kidney transplant patients
title_fullStr Five-gene signature predicts acute kidney injury in early kidney transplant patients
title_full_unstemmed Five-gene signature predicts acute kidney injury in early kidney transplant patients
title_short Five-gene signature predicts acute kidney injury in early kidney transplant patients
title_sort five-gene signature predicts acute kidney injury in early kidney transplant patients
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9004575/
https://www.ncbi.nlm.nih.gov/pubmed/35320116
http://dx.doi.org/10.18632/aging.203962
work_keys_str_mv AT zhaixia fivegenesignaturepredictsacutekidneyinjuryinearlykidneytransplantpatients
AT louhongqiang fivegenesignaturepredictsacutekidneyinjuryinearlykidneytransplantpatients
AT hujing fivegenesignaturepredictsacutekidneyinjuryinearlykidneytransplantpatients