Cargando…
A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL
Serial femtosecond crystallography is a rapidly developing method for determining the structure of biomolecules for samples which have proven challenging with conventional X-ray crystallography, such as for membrane proteins and microcrystals, or for time-resolved studies. The European XFEL, the fir...
| Autores principales: | , , , , , , , , , , , , , , , , , , , |
|---|---|
| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Nature Publishing Group UK
2022
|
| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9005607/ https://www.ncbi.nlm.nih.gov/pubmed/35414146 http://dx.doi.org/10.1038/s41597-022-01266-w |
| _version_ | 1784686493203169280 |
|---|---|
| author | Kirkwood, Henry J. de Wijn, Raphael Mills, Grant Letrun, Romain Kloos, Marco Vakili, Mohammad Karnevskiy, Mikhail Ahmed, Karim Bean, Richard J. Bielecki, Johan Dall’Antonia, Fabio Kim, Yoonhee Kim, Chan Koliyadu, Jayanath Round, Adam Sato, Tokushi Sikorski, Marcin Vagovič, Patrik Sztuk-Dambietz, Jolanta Mancuso, Adrian P. |
| author_facet | Kirkwood, Henry J. de Wijn, Raphael Mills, Grant Letrun, Romain Kloos, Marco Vakili, Mohammad Karnevskiy, Mikhail Ahmed, Karim Bean, Richard J. Bielecki, Johan Dall’Antonia, Fabio Kim, Yoonhee Kim, Chan Koliyadu, Jayanath Round, Adam Sato, Tokushi Sikorski, Marcin Vagovič, Patrik Sztuk-Dambietz, Jolanta Mancuso, Adrian P. |
| author_sort | Kirkwood, Henry J. |
| collection | PubMed |
| description | Serial femtosecond crystallography is a rapidly developing method for determining the structure of biomolecules for samples which have proven challenging with conventional X-ray crystallography, such as for membrane proteins and microcrystals, or for time-resolved studies. The European XFEL, the first high repetition rate hard X-ray free electron laser, provides the ability to record diffraction data at more than an order of magnitude faster than previously achievable, putting increased demand on sample delivery and data processing. This work describes a publicly available serial femtosecond crystallography dataset collected at the SPB/SFX instrument at the European XFEL. This dataset contains information suitable for algorithmic development for detector calibration, image classification and structure determination, as well as testing and training for future users of the European XFEL and other XFELs. |
| format | Online Article Text |
| id | pubmed-9005607 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2022 |
| publisher | Nature Publishing Group UK |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-90056072022-04-27 A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL Kirkwood, Henry J. de Wijn, Raphael Mills, Grant Letrun, Romain Kloos, Marco Vakili, Mohammad Karnevskiy, Mikhail Ahmed, Karim Bean, Richard J. Bielecki, Johan Dall’Antonia, Fabio Kim, Yoonhee Kim, Chan Koliyadu, Jayanath Round, Adam Sato, Tokushi Sikorski, Marcin Vagovič, Patrik Sztuk-Dambietz, Jolanta Mancuso, Adrian P. Sci Data Data Descriptor Serial femtosecond crystallography is a rapidly developing method for determining the structure of biomolecules for samples which have proven challenging with conventional X-ray crystallography, such as for membrane proteins and microcrystals, or for time-resolved studies. The European XFEL, the first high repetition rate hard X-ray free electron laser, provides the ability to record diffraction data at more than an order of magnitude faster than previously achievable, putting increased demand on sample delivery and data processing. This work describes a publicly available serial femtosecond crystallography dataset collected at the SPB/SFX instrument at the European XFEL. This dataset contains information suitable for algorithmic development for detector calibration, image classification and structure determination, as well as testing and training for future users of the European XFEL and other XFELs. Nature Publishing Group UK 2022-04-12 /pmc/articles/PMC9005607/ /pubmed/35414146 http://dx.doi.org/10.1038/s41597-022-01266-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
| spellingShingle | Data Descriptor Kirkwood, Henry J. de Wijn, Raphael Mills, Grant Letrun, Romain Kloos, Marco Vakili, Mohammad Karnevskiy, Mikhail Ahmed, Karim Bean, Richard J. Bielecki, Johan Dall’Antonia, Fabio Kim, Yoonhee Kim, Chan Koliyadu, Jayanath Round, Adam Sato, Tokushi Sikorski, Marcin Vagovič, Patrik Sztuk-Dambietz, Jolanta Mancuso, Adrian P. A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL |
| title | A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL |
| title_full | A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL |
| title_fullStr | A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL |
| title_full_unstemmed | A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL |
| title_short | A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL |
| title_sort | multi-million image serial femtosecond crystallography dataset collected at the european xfel |
| topic | Data Descriptor |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9005607/ https://www.ncbi.nlm.nih.gov/pubmed/35414146 http://dx.doi.org/10.1038/s41597-022-01266-w |
| work_keys_str_mv | AT kirkwoodhenryj amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT dewijnraphael amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT millsgrant amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT letrunromain amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT kloosmarco amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT vakilimohammad amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT karnevskiymikhail amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT ahmedkarim amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT beanrichardj amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT bieleckijohan amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT dallantoniafabio amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT kimyoonhee amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT kimchan amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT koliyadujayanath amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT roundadam amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT satotokushi amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT sikorskimarcin amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT vagovicpatrik amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT sztukdambietzjolanta amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT mancusoadrianp amultimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT kirkwoodhenryj multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT dewijnraphael multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT millsgrant multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT letrunromain multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT kloosmarco multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT vakilimohammad multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT karnevskiymikhail multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT ahmedkarim multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT beanrichardj multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT bieleckijohan multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT dallantoniafabio multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT kimyoonhee multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT kimchan multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT koliyadujayanath multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT roundadam multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT satotokushi multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT sikorskimarcin multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT vagovicpatrik multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT sztukdambietzjolanta multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel AT mancusoadrianp multimillionimageserialfemtosecondcrystallographydatasetcollectedattheeuropeanxfel |