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Automated coronary artery calcium scoring using nested U-Net and focal loss

Coronary artery calcium (CAC) is a great risk predictor of the atherosclerotic cardiovascular disease and CAC scores can be used to stratify the risk of heart disease. Current clinical analysis of CAC is performed using onsite semiautomated software. This semiautomated CAC analysis requires experien...

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Autores principales: Hong, Jia-Sheng, Tzeng, Yun-Hsuan, Yin, Wei-Hsian, Wu, Kuan-Ting, Hsu, Huan-Yu, Lu, Chia-Feng, Liu, Ho-Ren, Wu, Yu-Te
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9010683/
https://www.ncbi.nlm.nih.gov/pubmed/35465160
http://dx.doi.org/10.1016/j.csbj.2022.03.025
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author Hong, Jia-Sheng
Tzeng, Yun-Hsuan
Yin, Wei-Hsian
Wu, Kuan-Ting
Hsu, Huan-Yu
Lu, Chia-Feng
Liu, Ho-Ren
Wu, Yu-Te
author_facet Hong, Jia-Sheng
Tzeng, Yun-Hsuan
Yin, Wei-Hsian
Wu, Kuan-Ting
Hsu, Huan-Yu
Lu, Chia-Feng
Liu, Ho-Ren
Wu, Yu-Te
author_sort Hong, Jia-Sheng
collection PubMed
description Coronary artery calcium (CAC) is a great risk predictor of the atherosclerotic cardiovascular disease and CAC scores can be used to stratify the risk of heart disease. Current clinical analysis of CAC is performed using onsite semiautomated software. This semiautomated CAC analysis requires experienced radiologists and radiologic technologists and is both demanding and time-consuming. The purpose of this study is to develop a fully automated CAC detection model that can quantify CAC scores. A total of 1,811 cases of cardiac examinations involving contrast-free multidetector computed tomography were retrospectively collected. We divided the database into the Training Data Set, Validation Data Set, Testing Data Set 1, and Testing Data Set 2. The Training, Validation, and Testing Data Set 1 contained cases with clinically detected CAC; Testing Data Set 2 contained those without detected calcium. The intraclass correlation coefficients between the overall standard and model-predicted scores were 1.00 for both the Training Data Set and Testing Data Set 1. In Testing Data Set 2, the model was able to detect clinically undetected cases of mild calcium. The results suggested that the proposed model’s automated detection of CAC was highly consistent with clinical semiautomated CAC analysis. The proposed model demonstrated potential for clinical applications that can improve the quality of CAC risk stratification.
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spelling pubmed-90106832022-04-21 Automated coronary artery calcium scoring using nested U-Net and focal loss Hong, Jia-Sheng Tzeng, Yun-Hsuan Yin, Wei-Hsian Wu, Kuan-Ting Hsu, Huan-Yu Lu, Chia-Feng Liu, Ho-Ren Wu, Yu-Te Comput Struct Biotechnol J Research Article Coronary artery calcium (CAC) is a great risk predictor of the atherosclerotic cardiovascular disease and CAC scores can be used to stratify the risk of heart disease. Current clinical analysis of CAC is performed using onsite semiautomated software. This semiautomated CAC analysis requires experienced radiologists and radiologic technologists and is both demanding and time-consuming. The purpose of this study is to develop a fully automated CAC detection model that can quantify CAC scores. A total of 1,811 cases of cardiac examinations involving contrast-free multidetector computed tomography were retrospectively collected. We divided the database into the Training Data Set, Validation Data Set, Testing Data Set 1, and Testing Data Set 2. The Training, Validation, and Testing Data Set 1 contained cases with clinically detected CAC; Testing Data Set 2 contained those without detected calcium. The intraclass correlation coefficients between the overall standard and model-predicted scores were 1.00 for both the Training Data Set and Testing Data Set 1. In Testing Data Set 2, the model was able to detect clinically undetected cases of mild calcium. The results suggested that the proposed model’s automated detection of CAC was highly consistent with clinical semiautomated CAC analysis. The proposed model demonstrated potential for clinical applications that can improve the quality of CAC risk stratification. Research Network of Computational and Structural Biotechnology 2022-03-26 /pmc/articles/PMC9010683/ /pubmed/35465160 http://dx.doi.org/10.1016/j.csbj.2022.03.025 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Hong, Jia-Sheng
Tzeng, Yun-Hsuan
Yin, Wei-Hsian
Wu, Kuan-Ting
Hsu, Huan-Yu
Lu, Chia-Feng
Liu, Ho-Ren
Wu, Yu-Te
Automated coronary artery calcium scoring using nested U-Net and focal loss
title Automated coronary artery calcium scoring using nested U-Net and focal loss
title_full Automated coronary artery calcium scoring using nested U-Net and focal loss
title_fullStr Automated coronary artery calcium scoring using nested U-Net and focal loss
title_full_unstemmed Automated coronary artery calcium scoring using nested U-Net and focal loss
title_short Automated coronary artery calcium scoring using nested U-Net and focal loss
title_sort automated coronary artery calcium scoring using nested u-net and focal loss
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9010683/
https://www.ncbi.nlm.nih.gov/pubmed/35465160
http://dx.doi.org/10.1016/j.csbj.2022.03.025
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