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Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases

BACKGROUND: Identifying determinants of the novel severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) transmission in settings of contagion is fundamental to inform containment strategies. We assessed SARS-CoV-2 cycle threshold value (Ct) from the first diagnostic nasal–pharyngeal swab of s...

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Autores principales: Trunfio, Mattia, Richiardi, Lorenzo, Alladio, Francesca, Staffilano, Elena, Longo, Bianca, Venuti, Francesco, Ghisetti, Valeria, Burdino, Elisa, Bonora, Stefano, Vineis, Paolo, Di Perri, Giovanni, Calcagno, Andrea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9010948/
https://www.ncbi.nlm.nih.gov/pubmed/35432272
http://dx.doi.org/10.3389/fmicb.2022.829393
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author Trunfio, Mattia
Richiardi, Lorenzo
Alladio, Francesca
Staffilano, Elena
Longo, Bianca
Venuti, Francesco
Ghisetti, Valeria
Burdino, Elisa
Bonora, Stefano
Vineis, Paolo
Di Perri, Giovanni
Calcagno, Andrea
author_facet Trunfio, Mattia
Richiardi, Lorenzo
Alladio, Francesca
Staffilano, Elena
Longo, Bianca
Venuti, Francesco
Ghisetti, Valeria
Burdino, Elisa
Bonora, Stefano
Vineis, Paolo
Di Perri, Giovanni
Calcagno, Andrea
author_sort Trunfio, Mattia
collection PubMed
description BACKGROUND: Identifying determinants of the novel severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) transmission in settings of contagion is fundamental to inform containment strategies. We assessed SARS-CoV-2 cycle threshold value (Ct) from the first diagnostic nasal–pharyngeal swab of symptomatic index cases and which demographic or clinical characteristics among cases and contacts are associated with transmission risk within households. METHODS: This is a retrospective prevalence study on secondary SARS-CoV-2 cases (SC) among the household contacts of symptomatic adult index cases randomly sampled from all the SARS-CoV-2-positive diagnostic nasopharyngeal swabs analyzed at our regional referral hospital (Amedeo di Savoia Hospital, Turin, Italy) in March, 2020. Index cases underwent a telephone survey to collect their demographic and clinical data and all their household contacts. The Ct value of RdRp gene from the first diagnostic swab of index cases was recorded and index cases were grouped according to Ct tertiles (A < first tertile, first ≤ B ≤ second tertile, C ≥ second tertile). Post hoc analysis was performed in SC as well as contacts that did not undergo SARS-CoV-2 testing but developed compatible signs and symptoms. Non-parametric tests and generalized linear models were run. RESULTS: Index (n = 72) and contact (n = 164) median age was 54 (48–63) and 32 (20–56) years, respectively. A total of 60, 50, and 54 subjects were contacts of group A, B, and C index cases, respectively; 35.9% of contacts were SC. Twenty-four further subjects (14.6%) met the criteria for symptom-based likely positive SC. The secondary attack rate was 36.0% (28.6–43.4), assuming a mean incubation period of 5 days and a maximum infectious period of 20 days. SC prevalence differed between Ct groups (53.3% A, 32.0% B, 20.4% C; p < 0.001). No difference in SC was found according to sex, presence of signs/symptoms, and COVID-19 severity of index cases, or according to contacts’ sex and number per household. The age of both index cases [aOR 4.52 (1.2–17.0) for 60 vs. ≤45 years old] and contacts [aOR 3.66 (1.3–10.6) for 60 vs. ≤45years old] and the Ct of the index [aOR 0.17 (0.07–0.4) for Ct ≥ 31.8 vs. Ct < 24.4] independently associated with SC risk. Sensitivity analysis including symptoms-based likely positive SC supported all the previous results. CONCLUSION: In confined transmission settings such as households, PCR Ct values may inform on the contagiousness of infected subjects and age may modulate transmission/contagion risk.
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spelling pubmed-90109482022-04-16 Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases Trunfio, Mattia Richiardi, Lorenzo Alladio, Francesca Staffilano, Elena Longo, Bianca Venuti, Francesco Ghisetti, Valeria Burdino, Elisa Bonora, Stefano Vineis, Paolo Di Perri, Giovanni Calcagno, Andrea Front Microbiol Microbiology BACKGROUND: Identifying determinants of the novel severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) transmission in settings of contagion is fundamental to inform containment strategies. We assessed SARS-CoV-2 cycle threshold value (Ct) from the first diagnostic nasal–pharyngeal swab of symptomatic index cases and which demographic or clinical characteristics among cases and contacts are associated with transmission risk within households. METHODS: This is a retrospective prevalence study on secondary SARS-CoV-2 cases (SC) among the household contacts of symptomatic adult index cases randomly sampled from all the SARS-CoV-2-positive diagnostic nasopharyngeal swabs analyzed at our regional referral hospital (Amedeo di Savoia Hospital, Turin, Italy) in March, 2020. Index cases underwent a telephone survey to collect their demographic and clinical data and all their household contacts. The Ct value of RdRp gene from the first diagnostic swab of index cases was recorded and index cases were grouped according to Ct tertiles (A < first tertile, first ≤ B ≤ second tertile, C ≥ second tertile). Post hoc analysis was performed in SC as well as contacts that did not undergo SARS-CoV-2 testing but developed compatible signs and symptoms. Non-parametric tests and generalized linear models were run. RESULTS: Index (n = 72) and contact (n = 164) median age was 54 (48–63) and 32 (20–56) years, respectively. A total of 60, 50, and 54 subjects were contacts of group A, B, and C index cases, respectively; 35.9% of contacts were SC. Twenty-four further subjects (14.6%) met the criteria for symptom-based likely positive SC. The secondary attack rate was 36.0% (28.6–43.4), assuming a mean incubation period of 5 days and a maximum infectious period of 20 days. SC prevalence differed between Ct groups (53.3% A, 32.0% B, 20.4% C; p < 0.001). No difference in SC was found according to sex, presence of signs/symptoms, and COVID-19 severity of index cases, or according to contacts’ sex and number per household. The age of both index cases [aOR 4.52 (1.2–17.0) for 60 vs. ≤45 years old] and contacts [aOR 3.66 (1.3–10.6) for 60 vs. ≤45years old] and the Ct of the index [aOR 0.17 (0.07–0.4) for Ct ≥ 31.8 vs. Ct < 24.4] independently associated with SC risk. Sensitivity analysis including symptoms-based likely positive SC supported all the previous results. CONCLUSION: In confined transmission settings such as households, PCR Ct values may inform on the contagiousness of infected subjects and age may modulate transmission/contagion risk. Frontiers Media S.A. 2022-04-01 /pmc/articles/PMC9010948/ /pubmed/35432272 http://dx.doi.org/10.3389/fmicb.2022.829393 Text en Copyright © 2022 Trunfio, Richiardi, Alladio, Staffilano, Longo, Venuti, Ghisetti, Burdino, Bonora, Vineis, Di Perri and Calcagno. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Trunfio, Mattia
Richiardi, Lorenzo
Alladio, Francesca
Staffilano, Elena
Longo, Bianca
Venuti, Francesco
Ghisetti, Valeria
Burdino, Elisa
Bonora, Stefano
Vineis, Paolo
Di Perri, Giovanni
Calcagno, Andrea
Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases
title Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases
title_full Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases
title_fullStr Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases
title_full_unstemmed Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases
title_short Determinants of SARS-CoV-2 Contagiousness in Household Contacts of Symptomatic Adult Index Cases
title_sort determinants of sars-cov-2 contagiousness in household contacts of symptomatic adult index cases
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9010948/
https://www.ncbi.nlm.nih.gov/pubmed/35432272
http://dx.doi.org/10.3389/fmicb.2022.829393
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