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Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng

Rhizosphere microbiome promotes plant growth; however, the succession of rhizosphere microbial community during the growth stages of perennial medicinal plant Panax notoginseng (P. notoginseng) is still unclear. Here, amplicon sequencing was performed to assess the succession characteristics of rhiz...

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Autores principales: Wei, Guangfei, Li, Mengzhi, Zhang, Guozhuang, Chen, Zhongjian, Wei, Fugang, Jiao, Shuo, Qian, Jun, Wang, Yong, Wei, Jianhe, Wang, Yitao, Meng, Xiangxiao, Fitzgerald, Martin, Yu, Yuqi, Dong, Linlin, Chen, Shilin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9010977/
https://www.ncbi.nlm.nih.gov/pubmed/35432289
http://dx.doi.org/10.3389/fmicb.2022.853077
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author Wei, Guangfei
Li, Mengzhi
Zhang, Guozhuang
Chen, Zhongjian
Wei, Fugang
Jiao, Shuo
Qian, Jun
Wang, Yong
Wei, Jianhe
Wang, Yitao
Meng, Xiangxiao
Fitzgerald, Martin
Yu, Yuqi
Dong, Linlin
Chen, Shilin
author_facet Wei, Guangfei
Li, Mengzhi
Zhang, Guozhuang
Chen, Zhongjian
Wei, Fugang
Jiao, Shuo
Qian, Jun
Wang, Yong
Wei, Jianhe
Wang, Yitao
Meng, Xiangxiao
Fitzgerald, Martin
Yu, Yuqi
Dong, Linlin
Chen, Shilin
author_sort Wei, Guangfei
collection PubMed
description Rhizosphere microbiome promotes plant growth; however, the succession of rhizosphere microbial community during the growth stages of perennial medicinal plant Panax notoginseng (P. notoginseng) is still unclear. Here, amplicon sequencing was performed to assess the succession characteristics of rhizosphere microbiomes during developmental stages. Results showed that bacterial and fungal communities were mainly shaped by the development stages. The microbial α-diversities first increased and then decreased with plant growth and the variation in microbial composition was active at the 3-year root growth (3YR) stage. The variation trend of cross-domain co-occurrence network complexity was similar to that of α-diversities. Cross-domain nodes decreased at the 3YR stage and fungal nodes increased at the 3YR stage. This study provided a detailed and systematic survey of rhizosphere microbiomes during the growth stages of P. notoginseng. The findings revealed that the development stages of P. notoginseng drove the temporal dynamics of rhizosphere communities. This study helps in harnessing the power of microbiomes to evaluate herbal medicine growth and provides valuable information to guide the microbial breeding of medical plants.
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spelling pubmed-90109772022-04-16 Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng Wei, Guangfei Li, Mengzhi Zhang, Guozhuang Chen, Zhongjian Wei, Fugang Jiao, Shuo Qian, Jun Wang, Yong Wei, Jianhe Wang, Yitao Meng, Xiangxiao Fitzgerald, Martin Yu, Yuqi Dong, Linlin Chen, Shilin Front Microbiol Microbiology Rhizosphere microbiome promotes plant growth; however, the succession of rhizosphere microbial community during the growth stages of perennial medicinal plant Panax notoginseng (P. notoginseng) is still unclear. Here, amplicon sequencing was performed to assess the succession characteristics of rhizosphere microbiomes during developmental stages. Results showed that bacterial and fungal communities were mainly shaped by the development stages. The microbial α-diversities first increased and then decreased with plant growth and the variation in microbial composition was active at the 3-year root growth (3YR) stage. The variation trend of cross-domain co-occurrence network complexity was similar to that of α-diversities. Cross-domain nodes decreased at the 3YR stage and fungal nodes increased at the 3YR stage. This study provided a detailed and systematic survey of rhizosphere microbiomes during the growth stages of P. notoginseng. The findings revealed that the development stages of P. notoginseng drove the temporal dynamics of rhizosphere communities. This study helps in harnessing the power of microbiomes to evaluate herbal medicine growth and provides valuable information to guide the microbial breeding of medical plants. Frontiers Media S.A. 2022-04-01 /pmc/articles/PMC9010977/ /pubmed/35432289 http://dx.doi.org/10.3389/fmicb.2022.853077 Text en Copyright © 2022 Wei, Li, Zhang, Chen, Wei, Jiao, Qian, Wang, Wei, Wang, Meng, Fitzgerald, Yu, Dong and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Wei, Guangfei
Li, Mengzhi
Zhang, Guozhuang
Chen, Zhongjian
Wei, Fugang
Jiao, Shuo
Qian, Jun
Wang, Yong
Wei, Jianhe
Wang, Yitao
Meng, Xiangxiao
Fitzgerald, Martin
Yu, Yuqi
Dong, Linlin
Chen, Shilin
Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng
title Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng
title_full Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng
title_fullStr Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng
title_full_unstemmed Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng
title_short Temporal Dynamics of Rhizosphere Communities Across the Life Cycle of Panax notoginseng
title_sort temporal dynamics of rhizosphere communities across the life cycle of panax notoginseng
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9010977/
https://www.ncbi.nlm.nih.gov/pubmed/35432289
http://dx.doi.org/10.3389/fmicb.2022.853077
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