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Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma
BACKGROUND: This study aimed to develop and validate machine learning (ML)-based prediction models for lung metastasis (LM) in patients with Ewing sarcoma (ES), and to deploy the best model as an open access web tool. METHODS: We retrospectively analyzed data from the Surveillance Epidemiology and E...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9011057/ https://www.ncbi.nlm.nih.gov/pubmed/35433754 http://dx.doi.org/10.3389/fmed.2022.807382 |
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author | Li, Wenle Hong, Tao Liu, Wencai Dong, Shengtao Wang, Haosheng Tang, Zhi-Ri Li, Wanying Wang, Bing Hu, Zhaohui Liu, Qiang Qin, Yong Yin, Chengliang |
author_facet | Li, Wenle Hong, Tao Liu, Wencai Dong, Shengtao Wang, Haosheng Tang, Zhi-Ri Li, Wanying Wang, Bing Hu, Zhaohui Liu, Qiang Qin, Yong Yin, Chengliang |
author_sort | Li, Wenle |
collection | PubMed |
description | BACKGROUND: This study aimed to develop and validate machine learning (ML)-based prediction models for lung metastasis (LM) in patients with Ewing sarcoma (ES), and to deploy the best model as an open access web tool. METHODS: We retrospectively analyzed data from the Surveillance Epidemiology and End Results (SEER) Database from 2010 to 2016 and from four medical institutions to develop and validate predictive models for LM in patients with ES. Patient data from the SEER database was used as the training group (n = 929). Using demographic and clinicopathologic variables six ML-based models for predicting LM were developed, and internally validated using 10-fold cross validation. All ML-based models were subsequently externally validated using multiple data from four medical institutions (the validation group, n = 51). The predictive power of the models was evaluated by the area under receiver operating characteristic curve (AUC). The best-performing model was used to produce an online tool for use by clinicians to identify ES patients at risk from lung metastasis, to improve decision making and optimize individual treatment. RESULTS: The study cohort consisted of 929 patients from the SEER database and 51 patients from multiple medical centers, a total of 980 ES patients. Of these, 175 (18.8%) had lung metastasis. Multivariate logistic regression analysis was performed with survival time, T-stage, N-stage, surgery, and bone metastasis providing the independent predictive factors of LM. The AUC value of six predictive models ranged from 0.585 to 0.705. The Random Forest (RF) model (AUC = 0.705) using 4 variables was identified as the best predictive model of LM in ES patients and was employed to construct an online tool to assist clinicians in optimizing patient treatment. (https://share.streamlit.io/liuwencai123/es_lm/main/es_lm.py). CONCLUSIONS: Machine learning were found to have utility for predicting LM in patients with Ewing sarcoma, and the RF model gave the best performance. The accessibility of the predictive model as a web-based tool offers clear opportunities for improving the personalized treatment of patients with ES. |
format | Online Article Text |
id | pubmed-9011057 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-90110572022-04-16 Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma Li, Wenle Hong, Tao Liu, Wencai Dong, Shengtao Wang, Haosheng Tang, Zhi-Ri Li, Wanying Wang, Bing Hu, Zhaohui Liu, Qiang Qin, Yong Yin, Chengliang Front Med (Lausanne) Medicine BACKGROUND: This study aimed to develop and validate machine learning (ML)-based prediction models for lung metastasis (LM) in patients with Ewing sarcoma (ES), and to deploy the best model as an open access web tool. METHODS: We retrospectively analyzed data from the Surveillance Epidemiology and End Results (SEER) Database from 2010 to 2016 and from four medical institutions to develop and validate predictive models for LM in patients with ES. Patient data from the SEER database was used as the training group (n = 929). Using demographic and clinicopathologic variables six ML-based models for predicting LM were developed, and internally validated using 10-fold cross validation. All ML-based models were subsequently externally validated using multiple data from four medical institutions (the validation group, n = 51). The predictive power of the models was evaluated by the area under receiver operating characteristic curve (AUC). The best-performing model was used to produce an online tool for use by clinicians to identify ES patients at risk from lung metastasis, to improve decision making and optimize individual treatment. RESULTS: The study cohort consisted of 929 patients from the SEER database and 51 patients from multiple medical centers, a total of 980 ES patients. Of these, 175 (18.8%) had lung metastasis. Multivariate logistic regression analysis was performed with survival time, T-stage, N-stage, surgery, and bone metastasis providing the independent predictive factors of LM. The AUC value of six predictive models ranged from 0.585 to 0.705. The Random Forest (RF) model (AUC = 0.705) using 4 variables was identified as the best predictive model of LM in ES patients and was employed to construct an online tool to assist clinicians in optimizing patient treatment. (https://share.streamlit.io/liuwencai123/es_lm/main/es_lm.py). CONCLUSIONS: Machine learning were found to have utility for predicting LM in patients with Ewing sarcoma, and the RF model gave the best performance. The accessibility of the predictive model as a web-based tool offers clear opportunities for improving the personalized treatment of patients with ES. Frontiers Media S.A. 2022-04-01 /pmc/articles/PMC9011057/ /pubmed/35433754 http://dx.doi.org/10.3389/fmed.2022.807382 Text en Copyright © 2022 Li, Hong, Liu, Dong, Wang, Tang, Li, Wang, Hu, Liu, Qin and Yin. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Li, Wenle Hong, Tao Liu, Wencai Dong, Shengtao Wang, Haosheng Tang, Zhi-Ri Li, Wanying Wang, Bing Hu, Zhaohui Liu, Qiang Qin, Yong Yin, Chengliang Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma |
title | Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma |
title_full | Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma |
title_fullStr | Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma |
title_full_unstemmed | Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma |
title_short | Development of a Machine Learning-Based Predictive Model for Lung Metastasis in Patients With Ewing Sarcoma |
title_sort | development of a machine learning-based predictive model for lung metastasis in patients with ewing sarcoma |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9011057/ https://www.ncbi.nlm.nih.gov/pubmed/35433754 http://dx.doi.org/10.3389/fmed.2022.807382 |
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