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HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale

Rapid prototyping of biological functions has the common aim of generating, screening, and selecting variant libraries as quickly as possible. This approach is now to be extended by the HyperXpress workflow, which connects ligase cycling reaction for DNA assembly, multiply-primed rolling circle ampl...

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Detalles Bibliográficos
Autores principales: Zibulski, Darius Leon, Schlichting, Niels, Kabisch, Johannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9011061/
https://www.ncbi.nlm.nih.gov/pubmed/35433646
http://dx.doi.org/10.3389/fbioe.2022.832176
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author Zibulski, Darius Leon
Schlichting, Niels
Kabisch, Johannes
author_facet Zibulski, Darius Leon
Schlichting, Niels
Kabisch, Johannes
author_sort Zibulski, Darius Leon
collection PubMed
description Rapid prototyping of biological functions has the common aim of generating, screening, and selecting variant libraries as quickly as possible. This approach is now to be extended by the HyperXpress workflow, which connects ligase cycling reaction for DNA assembly, multiply-primed rolling circle amplification for signal amplification, and cell-free protein synthesis to a single vessel reaction in the lower µl scale. After substantial optimization of the method a proof-of-principle demonstrating the high flexibility of HyperXpress for semi-rational protein engineering by expanding, reducing, and replacing β-strands of three different green fluorescent proteins is described. These single-day experiments resulted in six functional, new-to-nature GFP prototypes.
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spelling pubmed-90110612022-04-16 HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale Zibulski, Darius Leon Schlichting, Niels Kabisch, Johannes Front Bioeng Biotechnol Bioengineering and Biotechnology Rapid prototyping of biological functions has the common aim of generating, screening, and selecting variant libraries as quickly as possible. This approach is now to be extended by the HyperXpress workflow, which connects ligase cycling reaction for DNA assembly, multiply-primed rolling circle amplification for signal amplification, and cell-free protein synthesis to a single vessel reaction in the lower µl scale. After substantial optimization of the method a proof-of-principle demonstrating the high flexibility of HyperXpress for semi-rational protein engineering by expanding, reducing, and replacing β-strands of three different green fluorescent proteins is described. These single-day experiments resulted in six functional, new-to-nature GFP prototypes. Frontiers Media S.A. 2022-04-01 /pmc/articles/PMC9011061/ /pubmed/35433646 http://dx.doi.org/10.3389/fbioe.2022.832176 Text en Copyright © 2022 Zibulski, Schlichting and Kabisch. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Zibulski, Darius Leon
Schlichting, Niels
Kabisch, Johannes
HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale
title HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale
title_full HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale
title_fullStr HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale
title_full_unstemmed HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale
title_short HyperXpress: Rapid Single Vessel DNA Assembly and Protein Production in Microliterscale
title_sort hyperxpress: rapid single vessel dna assembly and protein production in microliterscale
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9011061/
https://www.ncbi.nlm.nih.gov/pubmed/35433646
http://dx.doi.org/10.3389/fbioe.2022.832176
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