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Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics
Neuropeptides can mediate tumor cell proliferation and differentiation through autocrine, paracrine, neurosecretory, and endocrine mechanisms. This study investigated the expression and prognostic significance of neuropeptide Y receptor Y6 (NPY6R) in uveal melanoma (UVM) and preliminarily investigat...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9012612/ https://www.ncbi.nlm.nih.gov/pubmed/35432628 http://dx.doi.org/10.1155/2022/4143447 |
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author | Mei, ShiMin Li, Yue Kang, Xueran |
author_facet | Mei, ShiMin Li, Yue Kang, Xueran |
author_sort | Mei, ShiMin |
collection | PubMed |
description | Neuropeptides can mediate tumor cell proliferation and differentiation through autocrine, paracrine, neurosecretory, and endocrine mechanisms. This study investigated the expression and prognostic significance of neuropeptide Y receptor Y6 (NPY6R) in uveal melanoma (UVM) and preliminarily investigated the biological function of NPY6R in UVM. NPY6R was poorly expressed in most tumors and was associated with better prognosis in UVM. Among the clinicopathological features of UVM, NPY6R expression was lower in male patients. The area under the curve (AUC) value of NPY6R for the diagnosis of UVM was 0.676 (95% CI: 0.556–0.795). A nomogram including four clinical predictors was constructed. NPY6R expression was significantly associated with features of the UVM immune microenvironment. ESTIMATE and CIBERSORT algorithms were used to calculate the fraction of immune cells and the percentage of infiltration in each patient, respectively. NPY6R expression-related gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and gene set enrichment analyses were performed. GO and KEGG enrichment analyses revealed that NPY6R-related genes are mainly enriched in pathways and functions related to visual light perception. Gene set enrichment analysis suggested that NPY6R is associated with tumor progression in UVM. NPY6R is involved in the tumor progression of UVM and has a good predictive value as a prognostic marker of UVM. |
format | Online Article Text |
id | pubmed-9012612 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-90126122022-04-16 Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics Mei, ShiMin Li, Yue Kang, Xueran Dis Markers Research Article Neuropeptides can mediate tumor cell proliferation and differentiation through autocrine, paracrine, neurosecretory, and endocrine mechanisms. This study investigated the expression and prognostic significance of neuropeptide Y receptor Y6 (NPY6R) in uveal melanoma (UVM) and preliminarily investigated the biological function of NPY6R in UVM. NPY6R was poorly expressed in most tumors and was associated with better prognosis in UVM. Among the clinicopathological features of UVM, NPY6R expression was lower in male patients. The area under the curve (AUC) value of NPY6R for the diagnosis of UVM was 0.676 (95% CI: 0.556–0.795). A nomogram including four clinical predictors was constructed. NPY6R expression was significantly associated with features of the UVM immune microenvironment. ESTIMATE and CIBERSORT algorithms were used to calculate the fraction of immune cells and the percentage of infiltration in each patient, respectively. NPY6R expression-related gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and gene set enrichment analyses were performed. GO and KEGG enrichment analyses revealed that NPY6R-related genes are mainly enriched in pathways and functions related to visual light perception. Gene set enrichment analysis suggested that NPY6R is associated with tumor progression in UVM. NPY6R is involved in the tumor progression of UVM and has a good predictive value as a prognostic marker of UVM. Hindawi 2022-04-08 /pmc/articles/PMC9012612/ /pubmed/35432628 http://dx.doi.org/10.1155/2022/4143447 Text en Copyright © 2022 ShiMin Mei et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Mei, ShiMin Li, Yue Kang, Xueran Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics |
title | Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics |
title_full | Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics |
title_fullStr | Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics |
title_full_unstemmed | Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics |
title_short | Prognostic and Functional Analysis of NPY6R in Uveal Melanoma Using Bioinformatics |
title_sort | prognostic and functional analysis of npy6r in uveal melanoma using bioinformatics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9012612/ https://www.ncbi.nlm.nih.gov/pubmed/35432628 http://dx.doi.org/10.1155/2022/4143447 |
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