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lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer

Thyroid cancer (TC) is prone to recurrence, and biomarkers for predicting progression-free interval (PFI) are poorly explored. The study investigates the predictive value and underlying biological mechanisms of lncRNA CDKN2B-AS1 in TC. Combining RNA-seq and survival data, we identified that CDKN2B-A...

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Autores principales: Xue, Cheng, Yi, Cheng, Lin, Haiyang, Zhao, Jiajia, Yuan, Junhui, Chen, Yongzheng, Chen, Haibing, Lin, Li, Zhao, Yisha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9012630/
https://www.ncbi.nlm.nih.gov/pubmed/35432631
http://dx.doi.org/10.1155/2022/4317480
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author Xue, Cheng
Yi, Cheng
Lin, Haiyang
Zhao, Jiajia
Yuan, Junhui
Chen, Yongzheng
Chen, Haibing
Lin, Li
Zhao, Yisha
author_facet Xue, Cheng
Yi, Cheng
Lin, Haiyang
Zhao, Jiajia
Yuan, Junhui
Chen, Yongzheng
Chen, Haibing
Lin, Li
Zhao, Yisha
author_sort Xue, Cheng
collection PubMed
description Thyroid cancer (TC) is prone to recurrence, and biomarkers for predicting progression-free interval (PFI) are poorly explored. The study investigates the predictive value and underlying biological mechanisms of lncRNA CDKN2B-AS1 in TC. Combining RNA-seq and survival data, we identified that CDKN2B-AS1 was upregulated in TC samples and could be an excellent prognostic indicator. To exclude confounding factors, we divided patients into different subgroups using median CDKN2B-AS1 expression, and the effects of CDKN2B-AS1 on PFI and clinical features were explored in different clinical subgroups. Meanwhile, ssGSEA and ESTIMATE algorithms revealed that CDKN2B-AS1 overexpression may suggest the active state of the immune microenvironment. On the other hand, enrichment analysis also proved the potential influence of CDKN2B-AS1 on immune regulation in TC. Finally, we created a CDKN2B-AS1, microRNAs, and TFs network and discovered a new biomarker (CDKN2B-AS1) that might be employed as a therapeutic target in TC patients.
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spelling pubmed-90126302022-04-16 lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer Xue, Cheng Yi, Cheng Lin, Haiyang Zhao, Jiajia Yuan, Junhui Chen, Yongzheng Chen, Haibing Lin, Li Zhao, Yisha Dis Markers Research Article Thyroid cancer (TC) is prone to recurrence, and biomarkers for predicting progression-free interval (PFI) are poorly explored. The study investigates the predictive value and underlying biological mechanisms of lncRNA CDKN2B-AS1 in TC. Combining RNA-seq and survival data, we identified that CDKN2B-AS1 was upregulated in TC samples and could be an excellent prognostic indicator. To exclude confounding factors, we divided patients into different subgroups using median CDKN2B-AS1 expression, and the effects of CDKN2B-AS1 on PFI and clinical features were explored in different clinical subgroups. Meanwhile, ssGSEA and ESTIMATE algorithms revealed that CDKN2B-AS1 overexpression may suggest the active state of the immune microenvironment. On the other hand, enrichment analysis also proved the potential influence of CDKN2B-AS1 on immune regulation in TC. Finally, we created a CDKN2B-AS1, microRNAs, and TFs network and discovered a new biomarker (CDKN2B-AS1) that might be employed as a therapeutic target in TC patients. Hindawi 2022-04-08 /pmc/articles/PMC9012630/ /pubmed/35432631 http://dx.doi.org/10.1155/2022/4317480 Text en Copyright © 2022 Cheng Xue et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Xue, Cheng
Yi, Cheng
Lin, Haiyang
Zhao, Jiajia
Yuan, Junhui
Chen, Yongzheng
Chen, Haibing
Lin, Li
Zhao, Yisha
lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer
title lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer
title_full lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer
title_fullStr lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer
title_full_unstemmed lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer
title_short lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer
title_sort lncrna cdkn2b-as1 could be an indicator to identify prognosis and status of immune microenvironment in thyroid cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9012630/
https://www.ncbi.nlm.nih.gov/pubmed/35432631
http://dx.doi.org/10.1155/2022/4317480
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