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Guanosine Dianions Hydrated by One to Four Water Molecules

[Image: see text] Intermolecular interactions such as those present in molecule···water complexes may profoundly influence the physicochemical properties of molecules. Here, we carried out an experimental–computational study on doubly deprotonated guanosine monophosphate···water clusters, [dGMP – 2H...

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Autores principales: Makurat, Samanta, Yuan, Qinqin, Czub, Jacek, Chomicz-Mańka, Lidia, Cao, Wenjin, Wang, Xue-Bin, Rak, Janusz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9014458/
https://www.ncbi.nlm.nih.gov/pubmed/35380844
http://dx.doi.org/10.1021/acs.jpclett.2c00512
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author Makurat, Samanta
Yuan, Qinqin
Czub, Jacek
Chomicz-Mańka, Lidia
Cao, Wenjin
Wang, Xue-Bin
Rak, Janusz
author_facet Makurat, Samanta
Yuan, Qinqin
Czub, Jacek
Chomicz-Mańka, Lidia
Cao, Wenjin
Wang, Xue-Bin
Rak, Janusz
author_sort Makurat, Samanta
collection PubMed
description [Image: see text] Intermolecular interactions such as those present in molecule···water complexes may profoundly influence the physicochemical properties of molecules. Here, we carried out an experimental–computational study on doubly deprotonated guanosine monophosphate···water clusters, [dGMP – 2H](2–)·nH(2)O (n = 1–4), using a combination of negative anion photoelectron spectroscopy (NIPES) with molecular dynamics (MD) and quantum chemical (QM) calculations. Successive addition of water molecules to [dGMP – 2H](2–) increases the experimental adiabatic detachment (ADE) and vertical detachment energy (VDE) by 0.5–0.1 eV, depending on the cluster size. In order to choose the representative conformations, we combined MD simulations with a clustering procedure to identify low energy geometries for which ADEs and VDEs were computed at the CAM-B3LYP/6-31++G(d,p) level. Our results demonstrate that the assumed approach leads to sound geometries and energetics of the studied microsolvates since the calculated ADEs and VDEs are in pretty good agreement with the experimental characteristics. The evolution of hydrogen bonding with cluster size indicates the possibility of the occurrence of proton transfer for clusters comprising a larger number of water molecules.
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spelling pubmed-90144582022-04-19 Guanosine Dianions Hydrated by One to Four Water Molecules Makurat, Samanta Yuan, Qinqin Czub, Jacek Chomicz-Mańka, Lidia Cao, Wenjin Wang, Xue-Bin Rak, Janusz J Phys Chem Lett [Image: see text] Intermolecular interactions such as those present in molecule···water complexes may profoundly influence the physicochemical properties of molecules. Here, we carried out an experimental–computational study on doubly deprotonated guanosine monophosphate···water clusters, [dGMP – 2H](2–)·nH(2)O (n = 1–4), using a combination of negative anion photoelectron spectroscopy (NIPES) with molecular dynamics (MD) and quantum chemical (QM) calculations. Successive addition of water molecules to [dGMP – 2H](2–) increases the experimental adiabatic detachment (ADE) and vertical detachment energy (VDE) by 0.5–0.1 eV, depending on the cluster size. In order to choose the representative conformations, we combined MD simulations with a clustering procedure to identify low energy geometries for which ADEs and VDEs were computed at the CAM-B3LYP/6-31++G(d,p) level. Our results demonstrate that the assumed approach leads to sound geometries and energetics of the studied microsolvates since the calculated ADEs and VDEs are in pretty good agreement with the experimental characteristics. The evolution of hydrogen bonding with cluster size indicates the possibility of the occurrence of proton transfer for clusters comprising a larger number of water molecules. American Chemical Society 2022-04-05 2022-04-14 /pmc/articles/PMC9014458/ /pubmed/35380844 http://dx.doi.org/10.1021/acs.jpclett.2c00512 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Makurat, Samanta
Yuan, Qinqin
Czub, Jacek
Chomicz-Mańka, Lidia
Cao, Wenjin
Wang, Xue-Bin
Rak, Janusz
Guanosine Dianions Hydrated by One to Four Water Molecules
title Guanosine Dianions Hydrated by One to Four Water Molecules
title_full Guanosine Dianions Hydrated by One to Four Water Molecules
title_fullStr Guanosine Dianions Hydrated by One to Four Water Molecules
title_full_unstemmed Guanosine Dianions Hydrated by One to Four Water Molecules
title_short Guanosine Dianions Hydrated by One to Four Water Molecules
title_sort guanosine dianions hydrated by one to four water molecules
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9014458/
https://www.ncbi.nlm.nih.gov/pubmed/35380844
http://dx.doi.org/10.1021/acs.jpclett.2c00512
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