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Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise

BACKGROUND: Yoga is a multifaceted spiritual tool that helps in maintaining health, peace of mind, and positive thoughts. In the context of asana, yoga is similar to physical exercise. This study aims to construct a molecular network to find hub genes that play important roles in physical exercise a...

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Autores principales: Khokhar, Manoj, Tomo, Sojit, Gadwal, Ashita, Purohit, Purvi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer - Medknow 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9015089/
https://www.ncbi.nlm.nih.gov/pubmed/35444372
http://dx.doi.org/10.4103/ijoy.ijoy_146_21
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author Khokhar, Manoj
Tomo, Sojit
Gadwal, Ashita
Purohit, Purvi
author_facet Khokhar, Manoj
Tomo, Sojit
Gadwal, Ashita
Purohit, Purvi
author_sort Khokhar, Manoj
collection PubMed
description BACKGROUND: Yoga is a multifaceted spiritual tool that helps in maintaining health, peace of mind, and positive thoughts. In the context of asana, yoga is similar to physical exercise. This study aims to construct a molecular network to find hub genes that play important roles in physical exercise and yoga. METHODOLOGY: We combined differentially expressed genes (DEGs) in yoga and exercise using computational bioinformatics from publicly available gene expression omnibus (GEO) datasets and identified the codifferentially expressed mRNAs with GEO2R. The co-DEGs were divided into four different groups and each group was subjected to protein–protein interaction (PPI) network, pathways analysis, and gene ontology. RESULTS: Our study identified immunological modulation as a dominant target of differential expression in yoga and exercise. Yoga predominantly modulated genes affecting the Th1 and NK cells, whereas Cytokines, Macrophage activation, and oxidative stress were affected by exercise. We also observed that while yoga regulated genes for two main physiological functions of the body, namely Circadian Rhythm (BHLHE40) and immunity (LBP, T-box transcription factor 21, CEACAM1), exercise-regulated genes involved in apoptosis (BAG3, protein kinase C alpha), angiogenesis, and cellular adhesion (EPH receptor A1). CONCLUSION: The dissimilarity in the genetic expression patterns in Yoga and exercise highlights the discrete effect of each in biological systems. The integration and convergences of multi-omics signals can provide deeper and comprehensive insights into the various biological mechanisms through which yoga and exercise exert their beneficial effects and opens up potential newer research areas.
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spelling pubmed-90150892022-04-19 Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise Khokhar, Manoj Tomo, Sojit Gadwal, Ashita Purohit, Purvi Int J Yoga Original Article BACKGROUND: Yoga is a multifaceted spiritual tool that helps in maintaining health, peace of mind, and positive thoughts. In the context of asana, yoga is similar to physical exercise. This study aims to construct a molecular network to find hub genes that play important roles in physical exercise and yoga. METHODOLOGY: We combined differentially expressed genes (DEGs) in yoga and exercise using computational bioinformatics from publicly available gene expression omnibus (GEO) datasets and identified the codifferentially expressed mRNAs with GEO2R. The co-DEGs were divided into four different groups and each group was subjected to protein–protein interaction (PPI) network, pathways analysis, and gene ontology. RESULTS: Our study identified immunological modulation as a dominant target of differential expression in yoga and exercise. Yoga predominantly modulated genes affecting the Th1 and NK cells, whereas Cytokines, Macrophage activation, and oxidative stress were affected by exercise. We also observed that while yoga regulated genes for two main physiological functions of the body, namely Circadian Rhythm (BHLHE40) and immunity (LBP, T-box transcription factor 21, CEACAM1), exercise-regulated genes involved in apoptosis (BAG3, protein kinase C alpha), angiogenesis, and cellular adhesion (EPH receptor A1). CONCLUSION: The dissimilarity in the genetic expression patterns in Yoga and exercise highlights the discrete effect of each in biological systems. The integration and convergences of multi-omics signals can provide deeper and comprehensive insights into the various biological mechanisms through which yoga and exercise exert their beneficial effects and opens up potential newer research areas. Wolters Kluwer - Medknow 2022 2022-03-21 /pmc/articles/PMC9015089/ /pubmed/35444372 http://dx.doi.org/10.4103/ijoy.ijoy_146_21 Text en Copyright: © 2022 International Journal of Yoga https://creativecommons.org/licenses/by-nc-sa/4.0/This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms.
spellingShingle Original Article
Khokhar, Manoj
Tomo, Sojit
Gadwal, Ashita
Purohit, Purvi
Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise
title Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise
title_full Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise
title_fullStr Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise
title_full_unstemmed Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise
title_short Multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise
title_sort multi-omics integration and interactomics reveals molecular networks and regulators of the beneficial effect of yoga and exercise
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9015089/
https://www.ncbi.nlm.nih.gov/pubmed/35444372
http://dx.doi.org/10.4103/ijoy.ijoy_146_21
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