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A multi-parameter persistence framework for mathematical morphology
The field of mathematical morphology offers well-studied techniques for image processing and is applicable for studies ranging from materials science to ecological pattern formation. In this work, we view morphological operations through the lens of persistent homology, a tool at the heart of the fi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019063/ https://www.ncbi.nlm.nih.gov/pubmed/35440703 http://dx.doi.org/10.1038/s41598-022-09464-7 |
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author | Chung, Yu-Min Day, Sarah Hu, Chuan-Shen |
author_facet | Chung, Yu-Min Day, Sarah Hu, Chuan-Shen |
author_sort | Chung, Yu-Min |
collection | PubMed |
description | The field of mathematical morphology offers well-studied techniques for image processing and is applicable for studies ranging from materials science to ecological pattern formation. In this work, we view morphological operations through the lens of persistent homology, a tool at the heart of the field of topological data analysis. We demonstrate that morphological operations naturally form a multiparameter filtration and that persistent homology can then be used to extract information about both topology and geometry in the images as well as to automate methods for optimizing the study and rendering of structure in images. For illustration, we develop an automated approach that utilizes this framework to denoise binary, grayscale, and color images with salt and pepper and larger spatial scale noise. We measure our example unsupervised denoising approach to state-of-the-art supervised, deep learning methods to show that our results are comparable. |
format | Online Article Text |
id | pubmed-9019063 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90190632022-04-21 A multi-parameter persistence framework for mathematical morphology Chung, Yu-Min Day, Sarah Hu, Chuan-Shen Sci Rep Article The field of mathematical morphology offers well-studied techniques for image processing and is applicable for studies ranging from materials science to ecological pattern formation. In this work, we view morphological operations through the lens of persistent homology, a tool at the heart of the field of topological data analysis. We demonstrate that morphological operations naturally form a multiparameter filtration and that persistent homology can then be used to extract information about both topology and geometry in the images as well as to automate methods for optimizing the study and rendering of structure in images. For illustration, we develop an automated approach that utilizes this framework to denoise binary, grayscale, and color images with salt and pepper and larger spatial scale noise. We measure our example unsupervised denoising approach to state-of-the-art supervised, deep learning methods to show that our results are comparable. Nature Publishing Group UK 2022-04-19 /pmc/articles/PMC9019063/ /pubmed/35440703 http://dx.doi.org/10.1038/s41598-022-09464-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Chung, Yu-Min Day, Sarah Hu, Chuan-Shen A multi-parameter persistence framework for mathematical morphology |
title | A multi-parameter persistence framework for mathematical morphology |
title_full | A multi-parameter persistence framework for mathematical morphology |
title_fullStr | A multi-parameter persistence framework for mathematical morphology |
title_full_unstemmed | A multi-parameter persistence framework for mathematical morphology |
title_short | A multi-parameter persistence framework for mathematical morphology |
title_sort | multi-parameter persistence framework for mathematical morphology |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019063/ https://www.ncbi.nlm.nih.gov/pubmed/35440703 http://dx.doi.org/10.1038/s41598-022-09464-7 |
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