Cargando…
Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis
INTRODUCTION: The specific pathogenesis of ankylosing spondylitis (AS) remains unclear, and our study aimed to investigate the possible pathogenesis of AS. MATERIALS AND METHODS: Two datasets were downloaded from the GEO database to perform differentially expressed gene analysis, GO enrichment analy...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019158/ https://www.ncbi.nlm.nih.gov/pubmed/35464477 http://dx.doi.org/10.3389/fimmu.2022.861459 |
_version_ | 1784689192727478272 |
---|---|
author | Jiang, Jie Zhan, Xinli Qu, Haishun Liang, Tuo Li, Hao Chen, Liyi Huang, Shengsheng Sun, Xuhua Jiang, Wenyong Chen, Jiarui Chen, Tianyou Yao, Yuanlin Wu, Shaofeng Zhu, Jichong Liu, Chong |
author_facet | Jiang, Jie Zhan, Xinli Qu, Haishun Liang, Tuo Li, Hao Chen, Liyi Huang, Shengsheng Sun, Xuhua Jiang, Wenyong Chen, Jiarui Chen, Tianyou Yao, Yuanlin Wu, Shaofeng Zhu, Jichong Liu, Chong |
author_sort | Jiang, Jie |
collection | PubMed |
description | INTRODUCTION: The specific pathogenesis of ankylosing spondylitis (AS) remains unclear, and our study aimed to investigate the possible pathogenesis of AS. MATERIALS AND METHODS: Two datasets were downloaded from the GEO database to perform differentially expressed gene analysis, GO enrichment analysis, KEGG pathway analysis, DO enrichment analysis, GSEA analysis of differentially expressed genes, and construction of diagnostic genes using SVM and WGCNA along with Hypoxia-related genes. Also, drug sensitivity analysis was performed on diagnostic genes. To identify the differentially expressed immune genes in the AS and control groups, we analyzed the composition of immune cells between them. Then, we examined differentially expressed genes in three AS interspinous ligament specimens and three Degenerative lumbar spine specimens using high-throughput sequencing while the immune cells were examined using the neutrophil count data from routine blood tests of 1770 HLA-B27-positive samples and 7939 HLA-B27-negative samples. To assess the relationship between ANXA3 and SORL1 and disease activity, we took the neutrophil counts of the first 50 patients with above-average BASDAI scores and the last 50 patients with below-average BASDAI scores for statistical analysis. We used immunohistochemistry to verify the expression of ANXA3 and SORL1 in AS and in controls. RESULTS: ANXA3 and SORL1 were identified as new diagnostic genes for AS. These two genes showed a significant differential expression between AS and controls, along with showing a significant positive correlation with the neutrophil count. The results of high-throughput sequencing verified that these two gene deletions were indeed differentially expressed in AS versus controls. Data from a total of 9707 routine blood tests showed that the neutrophil count was significantly higher in AS patients than in controls (p < 0.001). Patients with AS with a high BASDAI score had a much higher neutrophil count than those with a low score, and the difference was statistically significant (p < 0.001). The results of immunohistochemistry showed that the expression of ANXA3 and SORL1 in AS was significantly higher than that in the control group. CONCLUSION: Upregulated of ANXA3, SORL1, and neutrophils may be a key factor in the progression of Ankylosing spondylitis. |
format | Online Article Text |
id | pubmed-9019158 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-90191582022-04-21 Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis Jiang, Jie Zhan, Xinli Qu, Haishun Liang, Tuo Li, Hao Chen, Liyi Huang, Shengsheng Sun, Xuhua Jiang, Wenyong Chen, Jiarui Chen, Tianyou Yao, Yuanlin Wu, Shaofeng Zhu, Jichong Liu, Chong Front Immunol Immunology INTRODUCTION: The specific pathogenesis of ankylosing spondylitis (AS) remains unclear, and our study aimed to investigate the possible pathogenesis of AS. MATERIALS AND METHODS: Two datasets were downloaded from the GEO database to perform differentially expressed gene analysis, GO enrichment analysis, KEGG pathway analysis, DO enrichment analysis, GSEA analysis of differentially expressed genes, and construction of diagnostic genes using SVM and WGCNA along with Hypoxia-related genes. Also, drug sensitivity analysis was performed on diagnostic genes. To identify the differentially expressed immune genes in the AS and control groups, we analyzed the composition of immune cells between them. Then, we examined differentially expressed genes in three AS interspinous ligament specimens and three Degenerative lumbar spine specimens using high-throughput sequencing while the immune cells were examined using the neutrophil count data from routine blood tests of 1770 HLA-B27-positive samples and 7939 HLA-B27-negative samples. To assess the relationship between ANXA3 and SORL1 and disease activity, we took the neutrophil counts of the first 50 patients with above-average BASDAI scores and the last 50 patients with below-average BASDAI scores for statistical analysis. We used immunohistochemistry to verify the expression of ANXA3 and SORL1 in AS and in controls. RESULTS: ANXA3 and SORL1 were identified as new diagnostic genes for AS. These two genes showed a significant differential expression between AS and controls, along with showing a significant positive correlation with the neutrophil count. The results of high-throughput sequencing verified that these two gene deletions were indeed differentially expressed in AS versus controls. Data from a total of 9707 routine blood tests showed that the neutrophil count was significantly higher in AS patients than in controls (p < 0.001). Patients with AS with a high BASDAI score had a much higher neutrophil count than those with a low score, and the difference was statistically significant (p < 0.001). The results of immunohistochemistry showed that the expression of ANXA3 and SORL1 in AS was significantly higher than that in the control group. CONCLUSION: Upregulated of ANXA3, SORL1, and neutrophils may be a key factor in the progression of Ankylosing spondylitis. Frontiers Media S.A. 2022-04-06 /pmc/articles/PMC9019158/ /pubmed/35464477 http://dx.doi.org/10.3389/fimmu.2022.861459 Text en Copyright © 2022 Jiang, Zhan, Qu, Liang, Li, Chen, Huang, Sun, Jiang, Chen, Chen, Yao, Wu, Zhu and Liu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Jiang, Jie Zhan, Xinli Qu, Haishun Liang, Tuo Li, Hao Chen, Liyi Huang, Shengsheng Sun, Xuhua Jiang, Wenyong Chen, Jiarui Chen, Tianyou Yao, Yuanlin Wu, Shaofeng Zhu, Jichong Liu, Chong Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis |
title | Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis |
title_full | Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis |
title_fullStr | Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis |
title_full_unstemmed | Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis |
title_short | Upregulated of ANXA3, SORL1, and Neutrophils May Be Key Factors in the Progressionof Ankylosing Spondylitis |
title_sort | upregulated of anxa3, sorl1, and neutrophils may be key factors in the progressionof ankylosing spondylitis |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019158/ https://www.ncbi.nlm.nih.gov/pubmed/35464477 http://dx.doi.org/10.3389/fimmu.2022.861459 |
work_keys_str_mv | AT jiangjie upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT zhanxinli upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT quhaishun upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT liangtuo upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT lihao upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT chenliyi upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT huangshengsheng upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT sunxuhua upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT jiangwenyong upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT chenjiarui upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT chentianyou upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT yaoyuanlin upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT wushaofeng upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT zhujichong upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis AT liuchong upregulatedofanxa3sorl1andneutrophilsmaybekeyfactorsintheprogressionofankylosingspondylitis |