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Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes
The traditional classification of stress-inducible 70 kDa heat shock protein (Hsp70) and heat shock cognate (Hsc70) requires a revision because of a recent finding that neither of them constitutes a monophyletic gene family. Here we inferred a phylogenetic relationship among Drosophila melanogaster...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Caltech Library
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019595/ https://www.ncbi.nlm.nih.gov/pubmed/35622499 http://dx.doi.org/10.17912/micropub.biology.000558 |
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author | Kaneko, Gen |
author_facet | Kaneko, Gen |
author_sort | Kaneko, Gen |
collection | PubMed |
description | The traditional classification of stress-inducible 70 kDa heat shock protein (Hsp70) and heat shock cognate (Hsc70) requires a revision because of a recent finding that neither of them constitutes a monophyletic gene family. Here we inferred a phylogenetic relationship among Drosophila melanogaster Hsp70 family members. D. melanogaster Hsp70 family members were separated into four known metazoan Hsp70 lineages: cytosolic A, cytosolic B, endoplasmic reticulum, and mitochondria. Hsc70s sporadically distributed in the phylogenetic tree, indicating their paraphyletic origin. Detailed sequence inspection found several motifs that support the phylogenetic analysis. Taken together, we propose new aliases of D. melanogaster Hsp70 family members based on their evolutionary history. |
format | Online Article Text |
id | pubmed-9019595 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Caltech Library |
record_format | MEDLINE/PubMed |
spelling | pubmed-90195952022-04-21 Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes Kaneko, Gen MicroPubl Biol New Finding The traditional classification of stress-inducible 70 kDa heat shock protein (Hsp70) and heat shock cognate (Hsc70) requires a revision because of a recent finding that neither of them constitutes a monophyletic gene family. Here we inferred a phylogenetic relationship among Drosophila melanogaster Hsp70 family members. D. melanogaster Hsp70 family members were separated into four known metazoan Hsp70 lineages: cytosolic A, cytosolic B, endoplasmic reticulum, and mitochondria. Hsc70s sporadically distributed in the phylogenetic tree, indicating their paraphyletic origin. Detailed sequence inspection found several motifs that support the phylogenetic analysis. Taken together, we propose new aliases of D. melanogaster Hsp70 family members based on their evolutionary history. Caltech Library 2022-04-20 /pmc/articles/PMC9019595/ /pubmed/35622499 http://dx.doi.org/10.17912/micropub.biology.000558 Text en Copyright: © 2022 by the authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | New Finding Kaneko, Gen Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes |
title |
Phylogenetic annotation of
Drosophila melanogaster
heat shock protein 70 genes
|
title_full |
Phylogenetic annotation of
Drosophila melanogaster
heat shock protein 70 genes
|
title_fullStr |
Phylogenetic annotation of
Drosophila melanogaster
heat shock protein 70 genes
|
title_full_unstemmed |
Phylogenetic annotation of
Drosophila melanogaster
heat shock protein 70 genes
|
title_short |
Phylogenetic annotation of
Drosophila melanogaster
heat shock protein 70 genes
|
title_sort | phylogenetic annotation of
drosophila melanogaster
heat shock protein 70 genes |
topic | New Finding |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019595/ https://www.ncbi.nlm.nih.gov/pubmed/35622499 http://dx.doi.org/10.17912/micropub.biology.000558 |
work_keys_str_mv | AT kanekogen phylogeneticannotationofdrosophilamelanogasterheatshockprotein70genes |