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Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes

The traditional classification of stress-inducible 70 kDa heat shock protein (Hsp70) and heat shock cognate (Hsc70) requires a revision because of a recent finding that neither of them constitutes a monophyletic gene family. Here we inferred a phylogenetic relationship among Drosophila melanogaster...

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Detalles Bibliográficos
Autor principal: Kaneko, Gen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Caltech Library 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019595/
https://www.ncbi.nlm.nih.gov/pubmed/35622499
http://dx.doi.org/10.17912/micropub.biology.000558
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author Kaneko, Gen
author_facet Kaneko, Gen
author_sort Kaneko, Gen
collection PubMed
description The traditional classification of stress-inducible 70 kDa heat shock protein (Hsp70) and heat shock cognate (Hsc70) requires a revision because of a recent finding that neither of them constitutes a monophyletic gene family. Here we inferred a phylogenetic relationship among Drosophila melanogaster Hsp70 family members. D. melanogaster Hsp70 family members were separated into four known metazoan Hsp70 lineages: cytosolic A, cytosolic B, endoplasmic reticulum, and mitochondria. Hsc70s sporadically distributed in the phylogenetic tree, indicating their paraphyletic origin. Detailed sequence inspection found several motifs that support the phylogenetic analysis. Taken together, we propose new aliases of D. melanogaster Hsp70 family members based on their evolutionary history.
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spelling pubmed-90195952022-04-21 Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes Kaneko, Gen MicroPubl Biol New Finding The traditional classification of stress-inducible 70 kDa heat shock protein (Hsp70) and heat shock cognate (Hsc70) requires a revision because of a recent finding that neither of them constitutes a monophyletic gene family. Here we inferred a phylogenetic relationship among Drosophila melanogaster Hsp70 family members. D. melanogaster Hsp70 family members were separated into four known metazoan Hsp70 lineages: cytosolic A, cytosolic B, endoplasmic reticulum, and mitochondria. Hsc70s sporadically distributed in the phylogenetic tree, indicating their paraphyletic origin. Detailed sequence inspection found several motifs that support the phylogenetic analysis. Taken together, we propose new aliases of D. melanogaster Hsp70 family members based on their evolutionary history. Caltech Library 2022-04-20 /pmc/articles/PMC9019595/ /pubmed/35622499 http://dx.doi.org/10.17912/micropub.biology.000558 Text en Copyright: © 2022 by the authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle New Finding
Kaneko, Gen
Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes
title Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes
title_full Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes
title_fullStr Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes
title_full_unstemmed Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes
title_short Phylogenetic annotation of Drosophila melanogaster heat shock protein 70 genes
title_sort phylogenetic annotation of drosophila melanogaster heat shock protein 70 genes
topic New Finding
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9019595/
https://www.ncbi.nlm.nih.gov/pubmed/35622499
http://dx.doi.org/10.17912/micropub.biology.000558
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