Cargando…
The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury
Acute lung injury (ALI) is an acute hypoxic respiratory failure caused by diffuse inflammatory injury in alveolar epithelial cells during severe infection, trauma, and shock. Among them, trauma/hemorrhagic shock (T/HS) is the main type of indirect lung injury. Despite a great number of clinical stud...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9021990/ https://www.ncbi.nlm.nih.gov/pubmed/35463979 http://dx.doi.org/10.1155/2022/3330552 |
_version_ | 1784689976422694912 |
---|---|
author | Li, Jianmin Pan, Chanyuan Tang, Chao Tan, Wenwen Liu, Hui Guan, Jing |
author_facet | Li, Jianmin Pan, Chanyuan Tang, Chao Tan, Wenwen Liu, Hui Guan, Jing |
author_sort | Li, Jianmin |
collection | PubMed |
description | Acute lung injury (ALI) is an acute hypoxic respiratory failure caused by diffuse inflammatory injury in alveolar epithelial cells during severe infection, trauma, and shock. Among them, trauma/hemorrhagic shock (T/HS) is the main type of indirect lung injury. Despite a great number of clinical studies, indirect factor trauma/hemorrhagic shock to the function and the mechanism in acute lung injury is not clear yet. Therefore, it is still necessary to carry on relevant analysis in order to thoroughly explore its molecular and cellular mechanisms and the pathway of disease function. In our research, we aimed to identify potential pathogenic genes and do modular analysis by downloading disease-related gene expression profile data. And our dataset is from the NCBI-GEO database. Then, we used the Clusterprofiler R package, GO function, and KEGG pathway enrichment analysis to analyze the core module genes. In addition, we also identified key transcription factors and noncoding RNAs. Based on the high degree of interaction of potential pathogenic genes and their involved functions and pathways, we identified 17 dysfunction modules. Among them, up to 9 modules significantly regulate the response to bacterial-derived molecules, and the response to lipopolysaccharide and other related functional pathways that mediate disease development. In addition, miR-290, miR-30c-5p, miR-195-5p, and miR-1-3p-based ncRNA and Jun, Atf1, and Atf3-based transcription factors have a total of 80 transcription drivers for functional modules. In summary, this study confirmed that miR-30c-5p activates lipopolysaccharide response pathway to promote the pathogenesis of ALI induced by hemorrhagic shock. This result can be an important direction for further research on related deepening diseases such as acute respiratory distress syndrome (ARDS). It further provides a piece of scientific medical evidence for revealing the pathogenic principle and cure difficulty of acute lung injury and also provides important guidance for the design of therapeutic strategies and drug development. |
format | Online Article Text |
id | pubmed-9021990 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-90219902022-04-22 The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury Li, Jianmin Pan, Chanyuan Tang, Chao Tan, Wenwen Liu, Hui Guan, Jing Biomed Res Int Research Article Acute lung injury (ALI) is an acute hypoxic respiratory failure caused by diffuse inflammatory injury in alveolar epithelial cells during severe infection, trauma, and shock. Among them, trauma/hemorrhagic shock (T/HS) is the main type of indirect lung injury. Despite a great number of clinical studies, indirect factor trauma/hemorrhagic shock to the function and the mechanism in acute lung injury is not clear yet. Therefore, it is still necessary to carry on relevant analysis in order to thoroughly explore its molecular and cellular mechanisms and the pathway of disease function. In our research, we aimed to identify potential pathogenic genes and do modular analysis by downloading disease-related gene expression profile data. And our dataset is from the NCBI-GEO database. Then, we used the Clusterprofiler R package, GO function, and KEGG pathway enrichment analysis to analyze the core module genes. In addition, we also identified key transcription factors and noncoding RNAs. Based on the high degree of interaction of potential pathogenic genes and their involved functions and pathways, we identified 17 dysfunction modules. Among them, up to 9 modules significantly regulate the response to bacterial-derived molecules, and the response to lipopolysaccharide and other related functional pathways that mediate disease development. In addition, miR-290, miR-30c-5p, miR-195-5p, and miR-1-3p-based ncRNA and Jun, Atf1, and Atf3-based transcription factors have a total of 80 transcription drivers for functional modules. In summary, this study confirmed that miR-30c-5p activates lipopolysaccharide response pathway to promote the pathogenesis of ALI induced by hemorrhagic shock. This result can be an important direction for further research on related deepening diseases such as acute respiratory distress syndrome (ARDS). It further provides a piece of scientific medical evidence for revealing the pathogenic principle and cure difficulty of acute lung injury and also provides important guidance for the design of therapeutic strategies and drug development. Hindawi 2022-04-13 /pmc/articles/PMC9021990/ /pubmed/35463979 http://dx.doi.org/10.1155/2022/3330552 Text en Copyright © 2022 Jianmin Li et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Li, Jianmin Pan, Chanyuan Tang, Chao Tan, Wenwen Liu, Hui Guan, Jing The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury |
title | The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury |
title_full | The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury |
title_fullStr | The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury |
title_full_unstemmed | The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury |
title_short | The Reaction Pathway of miR-30c-5p Activates Lipopolysaccharide Promoting the Course of Traumatic and Hemorrhagic Shock Acute Lung Injury |
title_sort | reaction pathway of mir-30c-5p activates lipopolysaccharide promoting the course of traumatic and hemorrhagic shock acute lung injury |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9021990/ https://www.ncbi.nlm.nih.gov/pubmed/35463979 http://dx.doi.org/10.1155/2022/3330552 |
work_keys_str_mv | AT lijianmin thereactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT panchanyuan thereactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT tangchao thereactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT tanwenwen thereactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT liuhui thereactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT guanjing thereactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT lijianmin reactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT panchanyuan reactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT tangchao reactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT tanwenwen reactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT liuhui reactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury AT guanjing reactionpathwayofmir30c5pactivateslipopolysaccharidepromotingthecourseoftraumaticandhemorrhagicshockacutelunginjury |