Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya

An Escherichia coli strain (sequence type 636) was isolated from an adult residing in an urban informal settlement in Nairobi, Kenya, and was sequenced using the Illumina MiSeq platform. The draft genome was 5,075,726 bp, with a Col(BS512) plasmid plus aph(6)-Id, bla(TEM-1B), and dfrA7 genes, which...

Descripción completa

Detalles Bibliográficos
Autores principales: Kikwai, Gilbert K., Juma, Bonventure, Nindo, Fredrick, Ochieng, Caroline, Wamola, Newton, Mbogo, Kevin, Call, Douglas R., Hunsperger, Elizabeth
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9022512/
https://www.ncbi.nlm.nih.gov/pubmed/35343778
http://dx.doi.org/10.1128/mra.01241-21
_version_ 1784690100440924160
author Kikwai, Gilbert K.
Juma, Bonventure
Nindo, Fredrick
Ochieng, Caroline
Wamola, Newton
Mbogo, Kevin
Call, Douglas R.
Hunsperger, Elizabeth
author_facet Kikwai, Gilbert K.
Juma, Bonventure
Nindo, Fredrick
Ochieng, Caroline
Wamola, Newton
Mbogo, Kevin
Call, Douglas R.
Hunsperger, Elizabeth
author_sort Kikwai, Gilbert K.
collection PubMed
description An Escherichia coli strain (sequence type 636) was isolated from an adult residing in an urban informal settlement in Nairobi, Kenya, and was sequenced using the Illumina MiSeq platform. The draft genome was 5,075,726 bp, with a Col(BS512) plasmid plus aph(6)-Id, bla(TEM-1B), and dfrA7 genes, which encode kanamycin, ampicillin, and trimethoprim resistance proteins, respectively.
format Online
Article
Text
id pubmed-9022512
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-90225122022-04-22 Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya Kikwai, Gilbert K. Juma, Bonventure Nindo, Fredrick Ochieng, Caroline Wamola, Newton Mbogo, Kevin Call, Douglas R. Hunsperger, Elizabeth Microbiol Resour Announc Genome Sequences An Escherichia coli strain (sequence type 636) was isolated from an adult residing in an urban informal settlement in Nairobi, Kenya, and was sequenced using the Illumina MiSeq platform. The draft genome was 5,075,726 bp, with a Col(BS512) plasmid plus aph(6)-Id, bla(TEM-1B), and dfrA7 genes, which encode kanamycin, ampicillin, and trimethoprim resistance proteins, respectively. American Society for Microbiology 2022-03-28 /pmc/articles/PMC9022512/ /pubmed/35343778 http://dx.doi.org/10.1128/mra.01241-21 Text en Copyright © 2022 Kikwai et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Kikwai, Gilbert K.
Juma, Bonventure
Nindo, Fredrick
Ochieng, Caroline
Wamola, Newton
Mbogo, Kevin
Call, Douglas R.
Hunsperger, Elizabeth
Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya
title Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya
title_full Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya
title_fullStr Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya
title_full_unstemmed Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya
title_short Genome Sequence of Escherichia coli Isolated from an Adult in Kibera, an Urban Informal Settlement in Nairobi, Kenya
title_sort genome sequence of escherichia coli isolated from an adult in kibera, an urban informal settlement in nairobi, kenya
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9022512/
https://www.ncbi.nlm.nih.gov/pubmed/35343778
http://dx.doi.org/10.1128/mra.01241-21
work_keys_str_mv AT kikwaigilbertk genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya
AT jumabonventure genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya
AT nindofredrick genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya
AT ochiengcaroline genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya
AT wamolanewton genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya
AT mbogokevin genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya
AT calldouglasr genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya
AT hunspergerelizabeth genomesequenceofescherichiacoliisolatedfromanadultinkiberaanurbaninformalsettlementinnairobikenya

Ejemplares similares